Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0077
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.     33   0.79 
BC033078-1|AAH33078.1|  419|Homo sapiens UCKL1 protein protein.        31   2.4  
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr...    30   4.2  
BX640639-1|CAE45787.1|  610|Homo sapiens hypothetical protein pr...    30   4.2  
BC073964-1|AAH73964.1|  957|Homo sapiens PHC1 protein protein.         30   4.2  
BC017748-1|AAH17748.1|  447|Homo sapiens PHC1 protein protein.         30   4.2  
BC002871-1|AAH02871.2|  481|Homo sapiens PHC1 protein protein.         30   4.2  
AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like prote...    30   4.2  

>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
          Length = 1236

 Score = 32.7 bits (71), Expect = 0.79
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 262  QHEVR*RNDLQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHA 390
            Q + R R + ++R RH EH   R H   G +E R+   GL  A
Sbjct: 902  QQQQRRRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPA 944


>BC033078-1|AAH33078.1|  419|Homo sapiens UCKL1 protein protein.
          Length = 419

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +1

Query: 307 HVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRR 414
           H  H Q R HLG G    R+    L   GQ D  RR
Sbjct: 330 HAHHHQVRAHLGTGRPRARAPAQLLAPQGQGDQSRR 365


>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
           protein.
          Length = 1004

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 447
           RG      D  R+ + G  H GQED  R  D+  +DE ++
Sbjct: 856 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 895


>BX640639-1|CAE45787.1|  610|Homo sapiens hypothetical protein
           protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 447
           RG      D  R+ + G  H GQED  R  D+  +DE ++
Sbjct: 462 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 501


>BC073964-1|AAH73964.1|  957|Homo sapiens PHC1 protein protein.
          Length = 957

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 447
           RG      D  R+ + G  H GQED  R  D+  +DE ++
Sbjct: 809 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 848


>BC017748-1|AAH17748.1|  447|Homo sapiens PHC1 protein protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 447
           RG      D  R+ + G  H GQED  R  D+  +DE ++
Sbjct: 299 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 338


>BC002871-1|AAH02871.2|  481|Homo sapiens PHC1 protein protein.
          Length = 481

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 447
           RG      D  R+ + G  H GQED  R  D+  +DE ++
Sbjct: 333 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 372


>AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like protein 1
            variant protein.
          Length = 1099

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 328  RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 447
            RG      D  R+ + G  H GQED  R  D+  +DE ++
Sbjct: 951  RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 990


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,583,740
Number of Sequences: 237096
Number of extensions: 1364660
Number of successful extensions: 3551
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)