Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10e01
         (682 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269088-1|AAK27326.1| 1011|Homo sapiens breast cancer antigen N...    33   1.2  
BC063790-1|AAH63790.1|  411|Homo sapiens FLJ30058 protein protein.     31   5.0  
AL590131-4|CAI41401.1|  411|Homo sapiens novel protein protein.        31   5.0  
AL590131-3|CAI41400.1|  218|Homo sapiens novel protein protein.        31   5.0  
AL590131-1|CAI41398.1|  535|Homo sapiens novel protein protein.        31   5.0  
AK128203-1|BAC87322.1|  547|Homo sapiens protein ( Homo sapiens ...    31   5.0  
AK054620-1|BAB70776.1|  411|Homo sapiens protein ( Homo sapiens ...    31   5.0  

>AF269088-1|AAK27326.1| 1011|Homo sapiens breast cancer antigen
            NY-BR-1.1 protein.
          Length = 1011

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +3

Query: 51   KTIERN*ENNEHKMHK--IKFELPDNSGESTKYLITLLIKEIHPSIGEIRKKLQVKHIEE 224
            K I+   EN + K  +      LP N  E  +  + +L ++I P   ++RKKL+VKH  E
Sbjct: 839  KEIKSQLENQKAKWEQELCSVRLPLNQEEEKRRNVDILKEKIRPE-EQLRKKLEVKHQLE 897

Query: 225  QELIKIREV 251
            Q L +I+++
Sbjct: 898  QTL-RIQDI 905


>BC063790-1|AAH63790.1|  411|Homo sapiens FLJ30058 protein protein.
          Length = 411

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 LITLLIKEIHPSIGE----IRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFK 311
           L TL + +I   IG+     ++K+ +  I +Q    I +V+  CC  I+K  ++ +GIF 
Sbjct: 67  LQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQ----IPQVVEACCQFIEKHGLSAVGIFT 122

Query: 312 LEYN 323
           LEY+
Sbjct: 123 LEYS 126


>AL590131-4|CAI41401.1|  411|Homo sapiens novel protein protein.
          Length = 411

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 LITLLIKEIHPSIGE----IRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFK 311
           L TL + +I   IG+     ++K+ +  I +Q    I +V+  CC  I+K  ++ +GIF 
Sbjct: 67  LQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQ----IPQVVEACCQFIEKHGLSAVGIFT 122

Query: 312 LEYN 323
           LEY+
Sbjct: 123 LEYS 126


>AL590131-3|CAI41400.1|  218|Homo sapiens novel protein protein.
          Length = 218

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 LITLLIKEIHPSIGE----IRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFK 311
           L TL + +I   IG+     ++K+ +  I +Q    I +V+  CC  I+K  ++ +GIF 
Sbjct: 155 LQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQ----IPQVVEACCQFIEKHGLSAVGIFT 210

Query: 312 LEYN 323
           LEY+
Sbjct: 211 LEYS 214


>AL590131-1|CAI41398.1|  535|Homo sapiens novel protein protein.
          Length = 535

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 LITLLIKEIHPSIGE----IRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFK 311
           L TL + +I   IG+     ++K+ +  I +Q    I +V+  CC  I+K  ++ +GIF 
Sbjct: 191 LQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQ----IPQVVEACCQFIEKHGLSAVGIFT 246

Query: 312 LEYN 323
           LEY+
Sbjct: 247 LEYS 250


>AK128203-1|BAC87322.1|  547|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46335 fis, clone TESTI4046073, weakly  similar
           to Rho-GTPase-activating protein 6. ).
          Length = 547

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 LITLLIKEIHPSIGE----IRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFK 311
           L TL + +I   IG+     ++K+ +  I +Q    I +V+  CC  I+K  ++ +GIF 
Sbjct: 203 LQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQ----IPQVVEACCQFIEKHGLSAVGIFT 258

Query: 312 LEYN 323
           LEY+
Sbjct: 259 LEYS 262


>AK054620-1|BAB70776.1|  411|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30058 fis, clone ADRGL2000074, weakly similar to
           RHO-GTPASE-ACTIVATING PROTEIN 6. ).
          Length = 411

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 LITLLIKEIHPSIGE----IRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFK 311
           L TL + +I   IG+     ++K+ +  I +Q    I +V+  CC  I+K  ++ +GIF 
Sbjct: 67  LQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQ----IPQVVEACCQFIEKHGLSAVGIFT 122

Query: 312 LEYN 323
           LEY+
Sbjct: 123 LEYS 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,378,797
Number of Sequences: 237096
Number of extensions: 1581778
Number of successful extensions: 3010
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3010
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)