Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0136
         (533 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC044840-1|AAH44840.1|  597|Homo sapiens giant axonal neuropathy...    30   5.9  
AF291673-1|AAG35311.1|  597|Homo sapiens gigaxonin protein.            30   5.9  

>BC044840-1|AAH44840.1|  597|Homo sapiens giant axonal neuropathy
           (gigaxonin) protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +1

Query: 211 DRHLAENGAHAPCQINILHKFIHHYFIEKLKYKIPN*TSLSEMTPVEELYIYVEEMLLDY 390
           D HL  +G   P Q NIL      Y   KL Y  P     +    +E + + V   +LDY
Sbjct: 31  DAHLVLDGEEIPVQKNIL-AAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDY 89

Query: 391 I 393
           I
Sbjct: 90  I 90


>AF291673-1|AAG35311.1|  597|Homo sapiens gigaxonin protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +1

Query: 211 DRHLAENGAHAPCQINILHKFIHHYFIEKLKYKIPN*TSLSEMTPVEELYIYVEEMLLDY 390
           D HL  +G   P Q NIL      Y   KL Y  P     +    +E + + V   +LDY
Sbjct: 31  DAHLVLDGEEIPVQKNIL-AAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDY 89

Query: 391 I 393
           I
Sbjct: 90  I 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,515,778
Number of Sequences: 237096
Number of extensions: 1272313
Number of successful extensions: 1736
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)