Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120056.Seq
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding prot... 146 9e-35
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 145 1e-34
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 145 1e-34
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 145 1e-34
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 145 1e-34
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 145 1e-34
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 145 1e-34
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 145 1e-34
BC030817-1|AAH30817.1| 315|Homo sapiens neuroguidin, EIF4E bind... 34 0.45
AY014957-1|AAK00511.1| 3031|Homo sapiens PI-3-kinase-related kin... 30 7.4
AF395444-1|AAM73708.1| 3521|Homo sapiens PI-3-kinase ATX protein. 30 7.4
AF186377-1|AAK58892.1| 2392|Homo sapiens LIP isoform of BLIP pro... 30 7.4
AB061371-1|BAB70696.1| 3657|Homo sapiens phosphatidylinositol 3-... 30 7.4
AB007881-1|BAA24851.2| 1988|Homo sapiens KIAA0421 protein. 30 7.4
DQ001411-1|AAY17216.1| 696|Homo sapiens neuregulin-3 protein. 30 9.8
BC017290-1|AAH17290.2| 560|Homo sapiens Unknown (protein for IM... 30 9.8
BC011687-1|AAH11687.1| 455|Homo sapiens FLJ20309 protein protein. 30 9.8
BC004193-1|AAH04193.2| 561|Homo sapiens Unknown (protein for IM... 30 9.8
AL589782-1|CAI17213.1| 713|Homo sapiens neuregulin 3 protein. 30 9.8
AL513204-1|CAH73645.1| 713|Homo sapiens neuregulin 3 protein. 30 9.8
AL391478-1|CAI15622.1| 713|Homo sapiens neuregulin 3 protein. 30 9.8
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 9.8
AL354749-1|CAH70641.1| 713|Homo sapiens neuregulin 3 protein. 30 9.8
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 9.8
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 9.8
AL136085-1|CAH71050.1| 713|Homo sapiens neuregulin 3 protein. 30 9.8
AL096706-1|CAI22410.1| 713|Homo sapiens neuregulin 3 protein. 30 9.8
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 30 9.8
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 30 9.8
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 30 9.8
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 30 9.8
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 30 9.8
>AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding protein
protein.
Length = 562
Score = 146 bits (353), Expect = 9e-35
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH +++
Sbjct: 192 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLKE 251
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 252 QLELFQNIRPLFINKPLIVVANK 274
Score = 70.5 bits (165), Expect = 6e-12
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = +3
Query: 543 RPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPE 722
RPP +P V+A++++ E RK++ ERD+E+E+GDDY+LDL+K + + E+YD IPE
Sbjct: 412 RPPFIPEGVVARRKRMEIVEPRKKR-ERDLELEMGDDYILDLQKYWDLMNSSEKYDKIPE 470
Query: 723 IW 728
IW
Sbjct: 471 IW 472
Score = 60.9 bits (141), Expect = 5e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 300 PVIETSTLTEEGVIQVKTEACDRLLAHRVETKMKGNKVNEVLNRL 344
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 208 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 267
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 268 QLELFQNIRPLFINKPLIVVANK 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A++++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 368 RDDKERPPFIPEGVVARRKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 426
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 427 DKIPEIW 433
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 316 PVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 360
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 206 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 265
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 266 QLELFQNIRPLFINKPLIVVANK 288
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A++++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 366 RDDKERPPFIPEGVVARRKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 424
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 425 DKIPEIW 431
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 314 PVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 358
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 208 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 267
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 268 QLELFQNIRPLFINKPLIVVANK 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A++++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 368 RDDKERPPFIPEGVVARRKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 426
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 427 DKIPEIW 433
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 316 PVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 360
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 208 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 267
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 268 QLELFQNIRPLFINKPLIVVANK 290
Score = 80.2 bits (189), Expect = 7e-15
Identities = 34/67 (50%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A+K++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 368 RDDKERPPFIPEGVVARKKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 426
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 427 DKIPEIW 433
Score = 60.9 bits (141), Expect = 5e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 370 VPVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
+PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 315 LPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 360
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 208 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 267
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 268 QLELFQNIRPLFINKPLIVVANK 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A++++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 368 RDDKERPPFIPEGVVARRKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 426
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 427 DKIPEIW 433
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 316 PVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 360
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 208 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 267
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 268 QLELFQNIRPLFINKPLIVVANK 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A++++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 368 RDDKERPPFIPEGVVARRKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 426
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 427 DKIPEIW 433
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 316 PVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 360
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +2
Query: 2 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 181
GH DYKYLRWQV+DTPGILDHPLE+RN IEMQA+TALAHLRAA+LY +D SEQCGH + +
Sbjct: 208 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 267
Query: 182 QISLFESIKPLFTSKPLIVVLNK 250
Q+ LF++I+PLF +KPLIVV NK
Sbjct: 268 QLELFQNIRPLFINKPLIVVANK 290
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/67 (49%), Positives = 52/67 (77%)
Frame = +3
Query: 528 RDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERY 707
RDDK RPP +P V+A++++ +E+RK++ ERD+E+E+GDDY+LDL+K + + E++
Sbjct: 368 RDDKERPPFIPEGVVARRKRMETEESRKKR-ERDLELEMGDDYILDLQKYWDLMNLSEKH 426
Query: 708 DVIPEIW 728
D IPEIW
Sbjct: 427 DKIPEIW 433
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 373 PVMRMSTVTEEGVQEVKIEACERLLGHRVTEKMRTKKVDGILNRL 507
PV+ ST+TEEGV +VK EAC+RLL HRV KM+ KV+ +LNRL
Sbjct: 316 PVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRL 360
>BC030817-1|AAH30817.1| 315|Homo sapiens neuroguidin, EIF4E binding
protein protein.
Length = 315
Score = 34.3 bits (75), Expect = 0.45
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 555 LPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDER 704
+PP ++ + E E K++LER L + +LK+ Y++ PE+ R
Sbjct: 172 VPPRLVPVHYDETEAEREKKRLERAKRRALSSSVIRELKEQYSDAPEEIR 221
>AY014957-1|AAK00511.1| 3031|Homo sapiens PI-3-kinase-related kinase
SMG-1 protein.
Length = 3031
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 585 KQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEI 725
+QAE + KR++ER+I L V ++K N+ + DE V+P++
Sbjct: 1813 QQAESKQSKREMEREITRSLFSSRVAEIKVNWFK-NRDEMLVVLPKL 1858
>AF395444-1|AAM73708.1| 3521|Homo sapiens PI-3-kinase ATX protein.
Length = 3521
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 585 KQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEI 725
+QAE + KR++ER+I L V ++K N+ + DE V+P++
Sbjct: 2303 QQAESKQSKREMEREITRSLFSSRVAEIKVNWFK-NRDEMLVVLPKL 2348
>AF186377-1|AAK58892.1| 2392|Homo sapiens LIP isoform of BLIP protein.
Length = 2392
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 585 KQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEI 725
+QAE + KR++ER+I L V ++K N+ + DE V+P++
Sbjct: 1174 QQAESKQSKREMEREITRSLFSSRVAEIKVNWFK-NRDEMLVVLPKL 1219
>AB061371-1|BAB70696.1| 3657|Homo sapiens phosphatidylinositol
3-kinase-related protein kinase protein.
Length = 3657
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 585 KQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEI 725
+QAE + KR++ER+I L V ++K N+ + DE V+P++
Sbjct: 2439 QQAESKQSKREMEREITRSLFSSRVAEIKVNWFK-NRDEMLVVLPKL 2484
>AB007881-1|BAA24851.2| 1988|Homo sapiens KIAA0421 protein.
Length = 1988
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 585 KQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEI 725
+QAE + KR++ER+I L V ++K N+ + DE V+P++
Sbjct: 770 QQAESKQSKREMEREITRSLFSSRVAEIKVNWFK-NRDEMLVVLPKL 815
>DQ001411-1|AAY17216.1| 696|Homo sapiens neuregulin-3 protein.
Length = 696
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>BC017290-1|AAH17290.2| 560|Homo sapiens Unknown (protein for
IMAGE:4904663) protein.
Length = 560
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 537 KPRPPVLPPSVLAKKEKQAEKENRKRK 617
KPR PP++ KK+K+ +K+ +K+K
Sbjct: 533 KPRKKTKPPALTKKKKKKKKKKKKKKK 559
>BC011687-1|AAH11687.1| 455|Homo sapiens FLJ20309 protein protein.
Length = 455
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 537 KPRPPVLPPSVLAKKEKQAEKENRKRK 617
KPR PP++ KK+K+ +K+ +K+K
Sbjct: 428 KPRKKTKPPALTKKKKKKKKKKKKKKK 454
>BC004193-1|AAH04193.2| 561|Homo sapiens Unknown (protein for
IMAGE:3533091) protein.
Length = 561
Score = 29.9 bits (64), Expect = 9.8
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 537 KPRPPVLPPSVLAKKEKQAEKENRKRK 617
KPR PP++ KK+K+ +K+ +K+K
Sbjct: 533 KPRKKTKPPALTKKKKKKKKKKKKKKK 559
>AL589782-1|CAI17213.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>AL513204-1|CAH73645.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>AL391478-1|CAI15622.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 549 PVLPPSVLAKKEKQAEKENRKRKLER 626
PVLP + +KEK EKE +K K E+
Sbjct: 683 PVLPEKLFEEKEKVKEKEKKKDKKEK 708
>AL354749-1|CAH70641.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 549 PVLPPSVLAKKEKQAEKENRKRKLER 626
PVLP + +KEK EKE +K K E+
Sbjct: 683 PVLPEKLFEEKEKVKEKEKKKDKKEK 708
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 549 PVLPPSVLAKKEKQAEKENRKRKLER 626
PVLP + +KEK EKE +K K E+
Sbjct: 683 PVLPEKLFEEKEKVKEKEKKKDKKEK 708
>AL136085-1|CAH71050.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>AL096706-1|CAI22410.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 29.9 bits (64), Expect = 9.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = -3
Query: 539 LVVARGRHRHGSRFKMPSTFFVRIFSVTRCPSSLSQASILTSCTPSSVTVDIRITGTTDR 360
LV ++G + PS+F + + T S+ S A+ SS T + RI+ T
Sbjct: 102 LVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATPSAGGAASSRTPN-RIS--TRL 158
Query: 359 SEFESALTRFPLEHVSVRSSSNCFLLRDSSSGLTTPS 249
+ A TRFP V +R+S R++++ T PS
Sbjct: 159 TTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPS 195
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 549 PVLPPSVLAKKEKQAEKENRKRKLER 626
PVLP + +KEK EKE +K K E+
Sbjct: 683 PVLPEKLFEEKEKVKEKEKKKDKKEK 708
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 449 PSSLSQ---ASILTSCTPSSVTVDIRITGTTDRSEFESALTRFPLEHVSVRSSSNCFLLR 279
PSSLS + L + TPSSV +T TTD + ++ P + SS +
Sbjct: 371 PSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTE 430
Query: 278 DSS-SGLTTPSCLTL 237
SS G T+P+ T+
Sbjct: 431 TSSLVGTTSPTMSTV 445
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 449 PSSLSQ---ASILTSCTPSSVTVDIRITGTTDRSEFESALTRFPLEHVSVRSSSNCFLLR 279
PSSLS + L + TPSSV +T TTD + ++ P + SS +
Sbjct: 371 PSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTE 430
Query: 278 DSS-SGLTTPSCLTL 237
SS G T+P+ T+
Sbjct: 431 TSSLVGTTSPTMSTV 445
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 449 PSSLSQ---ASILTSCTPSSVTVDIRITGTTDRSEFESALTRFPLEHVSVRSSSNCFLLR 279
PSSLS + L + TPSSV +T TTD + ++ P + SS +
Sbjct: 31 PSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTE 90
Query: 278 DSS-SGLTTPSCLTL 237
SS G T+P+ T+
Sbjct: 91 TSSLVGTTSPTMSTV 105
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 449 PSSLSQ---ASILTSCTPSSVTVDIRITGTTDRSEFESALTRFPLEHVSVRSSSNCFLLR 279
PSSLS + L + TPSSV +T TTD + ++ P + SS +
Sbjct: 31 PSSLSTDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTE 90
Query: 278 DSS-SGLTTPSCLTL 237
SS G T+P+ T+
Sbjct: 91 TSSLVGTTSPTMSTV 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,981,779
Number of Sequences: 237096
Number of extensions: 1709808
Number of successful extensions: 6033
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5994
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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