Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120052.Seq
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 143 5e-34
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 143 5e-34
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 143 5e-34
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 143 5e-34
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 143 5e-34
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 143 5e-34
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 143 5e-34
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 143 5e-34
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 143 5e-34
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 143 5e-34
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 143 5e-34
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 143 5e-34
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 143 5e-34
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 143 5e-34
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 143 5e-34
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 142 9e-34
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 142 9e-34
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 142 9e-34
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 142 9e-34
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 142 9e-34
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 142 9e-34
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 134 3e-31
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 134 3e-31
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 134 3e-31
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 134 3e-31
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 134 3e-31
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 128 2e-29
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 128 2e-29
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 120 6e-27
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 120 6e-27
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 105 2e-22
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 101 2e-21
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 101 2e-21
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 99 1e-20
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 99 1e-20
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 99 1e-20
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 99 1e-20
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 99 1e-20
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 36 0.12
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 36 0.12
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 36 0.12
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 36 0.12
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 36 0.16
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 36 0.16
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 36 0.16
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 36 0.16
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 36 0.16
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 36 0.16
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 36 0.16
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 36 0.16
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 36 0.16
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 36 0.16
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 36 0.21
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 36 0.21
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 35 0.28
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 35 0.28
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 35 0.28
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 35 0.28
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 35 0.28
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 35 0.28
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 35 0.28
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 35 0.28
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 35 0.28
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 35 0.28
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 35 0.28
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 35 0.28
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 35 0.28
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 35 0.36
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 35 0.36
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 35 0.36
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 35 0.36
BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein. 35 0.36
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 35 0.36
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 35 0.36
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 35 0.36
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 35 0.36
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 35 0.36
AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein. 35 0.36
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 35 0.36
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 35 0.36
AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein BRU... 35 0.36
AB209434-1|BAD92671.1| 305|Homo sapiens BRUNO-like 6 RNA-bindin... 35 0.36
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 35 0.36
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 34 0.48
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 34 0.48
AF248649-1|AAF86231.1| 83|Homo sapiens RNA-binding protein BRU... 34 0.48
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 34 0.64
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 34 0.64
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 34 0.64
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 34 0.64
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 34 0.64
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 34 0.64
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 34 0.64
AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein. 34 0.64
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 34 0.64
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 34 0.64
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 34 0.64
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 34 0.64
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 33 0.84
BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein pr... 33 0.84
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 33 0.84
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 33 1.1
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.1
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.1
AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif singl... 33 1.1
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 33 1.1
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 33 1.1
AF248651-1|AAF86233.1| 163|Homo sapiens RNA-binding protein BRU... 33 1.1
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 33 1.1
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 33 1.5
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 33 1.5
BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein. 33 1.5
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 33 1.5
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 33 1.5
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 33 1.5
AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif singl... 33 1.5
AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein pro... 33 1.5
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 33 1.5
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 32 1.9
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 32 1.9
DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein. 32 1.9
BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomeras... 32 1.9
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.9
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.9
BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomeras... 32 1.9
BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomeras... 32 1.9
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.9
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 1.9
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.9
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 32 1.9
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.9
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 32 1.9
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 1.9
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 1.9
AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL049824-3|CAI19349.1| 171|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL035404-7|CAI19578.1| 171|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomeras... 32 1.9
AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomera... 32 1.9
AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomera... 32 1.9
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.9
AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-tra... 32 1.9
AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-tra... 32 1.9
AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein. 32 1.9
AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein. 32 1.9
D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein. 32 2.6
D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein. 32 2.6
D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein. 32 2.6
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 32 2.6
BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, sing... 32 2.6
BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, sing... 32 2.6
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 32 2.6
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 32 2.6
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 31 3.4
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 31 3.4
D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein. 31 3.4
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 31 3.4
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 31 3.4
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 31 3.4
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 31 3.4
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 31 3.4
BC047235-1|AAH47235.1| 540|Homo sapiens upstream binding protei... 31 4.5
AK096139-1|BAC04708.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF198487-1|AAF32274.1| 540|Homo sapiens transcription factor LB... 31 4.5
AL591866-6|CAI16074.1| 405|Homo sapiens taste receptor, type 1,... 25 4.6
U63542-1|AAC51145.1| 252|Homo sapiens FAP protein protein. 31 5.9
BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein. 31 5.9
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 31 5.9
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 31 5.9
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 31 5.9
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 31 5.9
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 31 5.9
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 31 5.9
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 31 5.9
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 31 5.9
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 31 5.9
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 31 5.9
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 31 5.9
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 31 5.9
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 31 5.9
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 31 5.9
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 31 5.9
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 31 5.9
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 31 5.9
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 31 5.9
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 31 5.9
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 31 5.9
AL606516-3|CAO72050.1| 417|Homo sapiens novel protein protein. 30 7.8
AL606467-3|CAI41432.1| 417|Homo sapiens novel protein protein. 30 7.8
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 30 7.8
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 30 7.8
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 30 7.8
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 30 7.8
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 30 7.8
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 30 7.8
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 30 7.8
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 30 7.8
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 30 7.8
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 30 7.8
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 62 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 120
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 121 LRKEFSPFGSITSAKVMLEDGRSK 144
Score = 91.5 bits (217), Expect = 3e-18
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLT 388
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 147 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLT 190
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 45 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 87
Score = 38.3 bits (85), Expect = 0.030
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRIK 252
N+Y+KN + +DDE L++ F+ FG S KVM + +G+ K
Sbjct: 3 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSK 42
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 1 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 59
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 60 LRKEFSPFGSITSAKVMLEDGRSK 83
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 86 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 145
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 146 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 173
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 103 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 134
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 1 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 59
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 60 LRKEFSPFGSITSAKVMLEDGRSK 83
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 86 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 145
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 146 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 173
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 103 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 134
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 37.9 bits (84), Expect = 0.039
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 30 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 88
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 89 LRKEFSPFGSITSAKVMLEDGRSK 112
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 115 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 174
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 175 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 202
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 13 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 55
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 132 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 163
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 143 bits (347), Expect = 5e-34
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE + GK ++VGRAQKK ERQ ELKRKFEQLK ER++RYQGVNLY+KNLDDTIDDE+
Sbjct: 251 MNGKE-ISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 310 LRKEFSPFGSITSAKVMLEDGRSK 333
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 395
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 396 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 423
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL K ++ N+Y+KN + +DDE
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEEVDDES 206
Query: 181 LRKEFAPFGTITSAKVMLE-DGRIK 252
L++ F+ FG S KVM + +G+ K
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSK 231
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + E+A KAV EMNG+ + K ++V AQ+K +R+A L
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAEL 276
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 260 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
FV F + E A KA+ +MNG ++ + ++V + +++R+A L
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 353 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 384
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 142 bits (345), Expect = 9e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKRKFEQ+K +R+TRYQGVNLYVKNLDD IDDER
Sbjct: 226 MNGKEL-NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 284
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFGTITSAKVM+E GR K
Sbjct: 285 LRKEFSPFGTITSAKVMMEGGRSK 308
Score = 96.3 bits (229), Expect = 1e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+AHLT
Sbjct: 311 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP 370
Query: 437 XI--FQPSGASGFFVPSLP 487
I +QP+ SG+F+ ++P
Sbjct: 371 VINPYQPAPPSGYFIAAIP 389
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 133 MNGM-LLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDER 181
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 182 LKDLFGKFGPALSVKVMTDESGKSK 206
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 209 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 251
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 69 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 113
Score = 35.1 bits (77), Expect = 0.28
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 116 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 158
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERLTRYQGVNLY 144
+NG+ +V KPLYV AQ+K ERQ L ++ +++ S R +N Y
Sbjct: 328 MNGR-IVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 375
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 142 bits (345), Expect = 9e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKRKFEQ+K +R+TRYQGVNLYVKNLDD IDDER
Sbjct: 248 MNGKEL-NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 306
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFGTITSAKVM+E GR K
Sbjct: 307 LRKEFSPFGTITSAKVMMEGGRSK 330
Score = 95.5 bits (227), Expect = 2e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+AHLT
Sbjct: 333 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP 392
Query: 437 XI--FQPSGASGFFVPSLP 487
I +QP+ SG+F+ ++P
Sbjct: 393 VINPYQPAPPSGYFMAAIP 411
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 231 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 273
Score = 39.5 bits (88), Expect = 0.013
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F P S KVM E G+ K
Sbjct: 207 LKDLFGP---ALSVKVMTDESGKSK 228
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 35.1 bits (77), Expect = 0.28
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERLTRYQGVNLY 144
+NG+ +V KPLYV AQ+K ERQ L ++ +++ S R +N Y
Sbjct: 350 MNGR-IVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 397
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 142 bits (345), Expect = 9e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKRKFEQ+K +R+TRYQGVNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFGTITSAKVM+E GR K
Sbjct: 310 LRKEFSPFGTITSAKVMMEGGRSK 333
Score = 95.5 bits (227), Expect = 2e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+AHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP 395
Query: 437 XI--FQPSGASGFFVPSLP 487
I +QP+ SG+F+ ++P
Sbjct: 396 VINPYQPAPPSGYFMAAIP 414
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 35.1 bits (77), Expect = 0.28
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERLTRYQGVNLY 144
+NG+ +V KPLYV AQ+K ERQ L ++ +++ S R +N Y
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 400
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 142 bits (345), Expect = 9e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKRKFEQ+K +R+TRYQGVNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFGTITSAKVM+E GR K
Sbjct: 310 LRKEFSPFGTITSAKVMMEGGRSK 333
Score = 95.5 bits (227), Expect = 2e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+AHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP 395
Query: 437 XI--FQPSGASGFFVPSLP 487
I +QP+ SG+F+ ++P
Sbjct: 396 VINPYQPAPPSGYFMAAIP 414
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 35.1 bits (77), Expect = 0.28
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERLTRYQGVNLY 144
+NG+ +V KPLYV AQ+K ERQ L ++ +++ S R +N Y
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 400
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 142 bits (345), Expect = 9e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKRKFEQ+K +R+TRYQGVNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFGTITSAKVM+E GR K
Sbjct: 310 LRKEFSPFGTITSAKVMMEGGRSK 333
Score = 95.5 bits (227), Expect = 2e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+AHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP 395
Query: 437 XI--FQPSGASGFFVPSLP 487
I +QP+ SG+F+ ++P
Sbjct: 396 VINPYQPAPPSGYFMAAIP 414
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 35.1 bits (77), Expect = 0.28
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERLTRYQGVNLY 144
+NG+ +V KPLYV AQ+K ERQ L ++ +++ S R +N Y
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 400
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 142 bits (345), Expect = 9e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKRKFEQ+K +R+TRYQGVNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+PFGTITSAKVM+E GR K
Sbjct: 310 LRKEFSPFGTITSAKVMMEGGRSK 333
Score = 95.5 bits (227), Expect = 2e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+AHLT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP 395
Query: 437 XI--FQPSGASGFFVPSLP 487
I +QP+ SG+F+ ++P
Sbjct: 396 VINPYQPAPPSGYFMAAIP 414
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VGR + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID++ L F+ FG I S KV+ ++ K
Sbjct: 94 RKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Score = 35.1 bits (77), Expect = 0.28
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 33.5 bits (73), Expect = 0.84
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERLTRYQGVNLY 144
+NG+ +V KPLYV AQ+K ERQ L ++ +++ S R +N Y
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 400
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 134 bits (324), Expect = 3e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKR FEQ+K +R+TRYQ VNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRK F+PFGTITSAKVM+E GR K
Sbjct: 310 LRKAFSPFGTITSAKVMMEGGRSK 333
Score = 86.6 bits (205), Expect = 9e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLT 388
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+A+LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLT 379
Score = 47.6 bits (108), Expect = 5e-05
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ G+ ++VG+ + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNGRKVFVGQFKSRKEREAELGARAKEFP----------NVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAEL 183
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N++VKNLD +I+++ L + FG I S V+ ++ K
Sbjct: 94 RKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK 138
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ERQ L ++ Q
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAYLTNEYMQ 384
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 134 bits (324), Expect = 3e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKR FEQ+K +R+TRYQ VNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRK F+PFGTITSAKVM+E GR K
Sbjct: 310 LRKAFSPFGTITSAKVMMEGGRSK 333
Score = 86.6 bits (205), Expect = 9e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLT 388
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+A+LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLT 379
Score = 47.6 bits (108), Expect = 5e-05
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ G+ ++VG+ + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNGRKVFVGQFKSRKEREAELGARAKEFP----------NVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAEL 183
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N++VKNLD +I+++ L + FG I S V+ ++ K
Sbjct: 94 RKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK 138
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ERQ L ++ Q
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAYLTNEYMQ 384
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 134 bits (324), Expect = 3e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKR FEQ+K +R+TRYQ VNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRK F+PFGTITSAKVM+E GR K
Sbjct: 310 LRKAFSPFGTITSAKVMMEGGRSK 333
Score = 86.6 bits (205), Expect = 9e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLT 388
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+A+LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLT 379
Score = 47.6 bits (108), Expect = 5e-05
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ G+ ++VG+ + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNGRKVFVGQFKSRKEREAELGARAKEFP----------NVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAEL 183
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N++VKNLD +I+++ L + FG I S V+ ++ K
Sbjct: 94 RKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK 138
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ERQ L ++ Q
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAYLTNEYMQ 384
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 134 bits (324), Expect = 3e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKR FEQ+K +R+TRYQ VNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRK F+PFGTITSAKVM+E GR K
Sbjct: 310 LRKAFSPFGTITSAKVMMEGGRSK 333
Score = 86.6 bits (205), Expect = 9e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLT 388
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+A+LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLT 379
Score = 47.6 bits (108), Expect = 5e-05
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ G+ ++VG+ + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNGRKVFVGQFKSRKEREAELGARAKEFP----------NVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAEL 183
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N++VKNLD +I+++ L + FG I S V+ ++ K
Sbjct: 94 RKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK 138
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ERQ L ++ Q
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAYLTNEYMQ 384
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 134 bits (324), Expect = 3e-31
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKEL GK +YVGRAQKK ERQ ELKR FEQ+K +R+TRYQ VNLYVKNLDD IDDER
Sbjct: 251 MNGKEL-NGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDER 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRK F+PFGTITSAKVM+E GR K
Sbjct: 310 LRKAFSPFGTITSAKVMMEGGRSK 333
Score = 86.6 bits (205), Expect = 9e-17
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLT 388
GFVCFSSPEEATKAVTEMNGRIV TKPLYVALAQRKE+R+A+LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLT 379
Score = 47.6 bits (108), Expect = 5e-05
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ G+ ++VG+ + + ER+ EL + ++ N+Y+KN + +DDER
Sbjct: 158 MNGM-LLNGRKVFVGQFKSRKEREAELGARAKEFP----------NVYIKNFGEDMDDER 206
Query: 181 LRKEFAPFGTITSAKVML-EDGRIK 252
L+ F FG S KVM E G+ K
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSK 231
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F E+A KAV EMNG+ + K +YV AQ+K +R+ L
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ +MNG ++ + ++V + +++R+A L
Sbjct: 141 GFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAEL 183
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N++VKNLD +I+++ L + FG I S V+ ++ K
Sbjct: 94 RKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK 138
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ERQ L ++ Q
Sbjct: 353 MNGR-IVATKPLYVALAQRKEERQAYLTNEYMQ 384
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 128 bits (310), Expect = 2e-29
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE V G+ LY GRAQK+ ERQ ELKR+FEQ+K +RL RYQGVNLYVKNLDD+IDD++
Sbjct: 251 MNGKE-VSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+P+G ITSAKVM E G K
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGHSK 333
Score = 93.1 bits (221), Expect = 1e-18
Identities = 47/80 (58%), Positives = 53/80 (66%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE+RKA LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNP 395
Query: 437 XIFQPSGASGFFVPSLPPAP 496
+ S +F+P++P P
Sbjct: 396 LLGSFQQPSSYFLPAMPQPP 415
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F EEA KAV MNG+ V + LY AQ++ +R+ L
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL+D+ID++ L F+ FG I S KV ++
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE 134
Score = 38.3 bits (85), Expect = 0.030
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VG + + ER+ EL + + N+YVKNL +D++
Sbjct: 158 MNGM-LLNDRKVFVGHFKSRREREAELGARALEF----------TNIYVKNLPVDVDEQG 206
Query: 181 LRKEFAPFGTITSAKVMLED 240
L+ F+ FG + S KVM ++
Sbjct: 207 LQDLFSQFGKMLSVKVMRDN 226
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ MNG ++ + ++V + + +R+A L
Sbjct: 141 GFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 120
+NG+ +V KPLYV AQ+K ER+ L ++ Q S T
Sbjct: 353 MNGR-IVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRT 391
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 128 bits (310), Expect = 2e-29
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE V G+ LY GRAQK+ ERQ ELKR+FEQ+K +RL RYQGVNLYVKNLDD+IDD++
Sbjct: 251 MNGKE-VSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
LRKEF+P+G ITSAKVM E G K
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGHSK 333
Score = 93.1 bits (221), Expect = 1e-18
Identities = 47/80 (58%), Positives = 53/80 (66%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE+RKA LT
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNP 395
Query: 437 XIFQPSGASGFFVPSLPPAP 496
+ S +F+P++P P
Sbjct: 396 LLGSFQQPSSYFLPAMPQPP 415
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F EEA KAV MNG+ V + LY AQ++ +R+ L
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL+D+ID++ L F+ FG I S KV ++
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE 134
Score = 38.3 bits (85), Expect = 0.030
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VG + + ER+ EL + + N+YVKNL +D++
Sbjct: 158 MNGM-LLNDRKVFVGHFKSRREREAELGARALEF----------TNIYVKNLPVDVDEQG 206
Query: 181 LRKEFAPFGTITSAKVMLED 240
L+ F+ FG + S KVM ++
Sbjct: 207 LQDLFSQFGKMLSVKVMRDN 226
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ MNG ++ + ++V + + +R+A L
Sbjct: 141 GFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLT 120
+NG+ +V KPLYV AQ+K ER+ L ++ Q S T
Sbjct: 353 MNGR-IVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRT 391
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 120 bits (289), Expect = 6e-27
Identities = 55/75 (73%), Positives = 66/75 (88%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE V G+ LY GRAQK+ ERQ ELKR+FEQ+K +RL RYQGVNLYVKNLDD+IDD++
Sbjct: 251 MNGKE-VSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 181 LRKEFAPFGTITSAK 225
LRKEF+P+G ITSAK
Sbjct: 310 LRKEFSPYGVITSAK 324
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F EEA KAV MNG+ V + LY AQ++ +R+ L
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL+D+ID++ L F+ FG I S KV ++
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE 134
Score = 38.3 bits (85), Expect = 0.030
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VG + + ER+ EL + + N+YVKNL +D++
Sbjct: 158 MNGM-LLNDRKVFVGHFKSRREREAELGARALEF----------TNIYVKNLPVDVDEQG 206
Query: 181 LRKEFAPFGTITSAKVMLED 240
L+ F+ FG + S KVM ++
Sbjct: 207 LQDLFSQFGKMLSVKVMRDN 226
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ MNG ++ + ++V + + +R+A L
Sbjct: 141 GFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 120 bits (289), Expect = 6e-27
Identities = 55/75 (73%), Positives = 66/75 (88%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE V G+ LY GRAQK+ ERQ ELKR+FEQ+K +RL RYQGVNLYVKNLDD+IDD++
Sbjct: 251 MNGKE-VSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDK 309
Query: 181 LRKEFAPFGTITSAK 225
LRKEF+P+G ITSAK
Sbjct: 310 LRKEFSPYGVITSAK 324
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F EEA KAV MNG+ V + LY AQ++ +R+ L
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNEL 276
Score = 39.1 bits (87), Expect = 0.017
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL+D+ID++ L F+ FG I S KV ++
Sbjct: 94 RKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE 134
Score = 38.3 bits (85), Expect = 0.030
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L+ + ++VG + + ER+ EL + + N+YVKNL +D++
Sbjct: 158 MNGM-LLNDRKVFVGHFKSRREREAELGARALEF----------TNIYVKNLPVDVDEQG 206
Query: 181 LRKEFAPFGTITSAKVMLED 240
L+ F+ FG + S KVM ++
Sbjct: 207 LQDLFSQFGKMLSVKVMRDN 226
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV F + E A +A+ MNG ++ + ++V + + +R+A L
Sbjct: 141 GFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 105 bits (251), Expect = 2e-22
Identities = 50/81 (61%), Positives = 61/81 (75%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NGKE G Y+ A KK E Q ELK KFEQ+K +R+TRYQG N+ VKNLD++IDDER
Sbjct: 71 VNGKEF-SGNQTYICLAPKKVEEQTELKCKFEQMKQDRITRYQGANVCVKNLDESIDDER 129
Query: 181 LRKEFAPFGTITSAKVMLEDG 243
L+KEF+PFG I SA VM+E G
Sbjct: 130 LQKEFSPFGIINSANVMMEGG 150
Score = 77.0 bits (181), Expect = 7e-14
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 251 RLGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXX 430
R GFVCFSSPEE KAVT MNG+IV +KPL+VALAQ KE R AH T
Sbjct: 154 RFGFVCFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQRLAHFTNQYMQKMASVRAVP 213
Query: 431 XXXI--FQPSGASGFFVPSLP 487
I +QP+ ++ +FV ++P
Sbjct: 214 HPVINPYQPAPSTCYFVAAIP 234
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 47 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 106
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 107 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 134
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 121 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
RYQGVNLY+KNLDDTIDDE+LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 1 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSK 44
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 64 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 95
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 101 bits (243), Expect = 2e-21
Identities = 56/89 (62%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXX 436
GFVCFSSPEEATKAVTEMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 34 GFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPAN 93
Query: 437 XI---FQPSGASGFFVPSLPPA---PRYY 505
I FQP+ A G+FVP++P A P YY
Sbjct: 94 AILNQFQPA-AGGYFVPAVPQAQGRPPYY 121
Score = 55.6 bits (128), Expect = 2e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +1
Query: 163 TIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
T DDE+LRKEF+PFG+ITSAKVMLEDGR K
Sbjct: 2 TSDDEKLRKEFSPFGSITSAKVMLEDGRSK 31
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 99
+NG+ +V KPLYV AQ+K ER+ L ++ Q
Sbjct: 51 MNGR-IVGSKPLYVALAQRKEERKAHLTNQYMQ 82
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 99.1 bits (236), Expect = 1e-20
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
L+GK ++GK LYVGRAQKK ER EL+R+FE+L+ + +R GV +Y+KNLD+TI+DE+
Sbjct: 259 LHGKS-IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEK 317
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
L++EF+ FG+I+ AKVM+E G+ K
Sbjct: 318 LKEEFSSFGSISRAKVMMEVGQGK 341
Score = 57.6 bits (133), Expect = 5e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
G VCFSS EEATKAV EMNGRIVG+KPL+V L Q +
Sbjct: 344 GVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L + +YVGR + ER E++ + +R T N++VKN+ D IDDE+
Sbjct: 165 MNGVRL-NNRQVYVGRFKFPEERAAEVRTR------DRATF---TNVFVKNIGDDIDDEK 214
Query: 181 LRKEFAPFGTITSAKVM 231
L++ F +G S KV+
Sbjct: 215 LKELFCEYGPTESVKVI 231
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + + E A KAV +++G+ + K LYV AQ+K +R A L
Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAEL 284
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID+ L F+ FG I S KV+ +D K
Sbjct: 101 RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK 145
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 99.1 bits (236), Expect = 1e-20
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
L+GK ++GK LYVGRAQKK ER EL+R+FE+L+ + +R GV +Y+KNLD+TI+DE+
Sbjct: 95 LHGKS-IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEK 153
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
L++EF+ FG+I+ AKVM+E G+ K
Sbjct: 154 LKEEFSSFGSISRAKVMMEVGQGK 177
Score = 57.6 bits (133), Expect = 5e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
G VCFSS EEATKAV EMNGRIVG+KPL+V L Q +
Sbjct: 180 GVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 215
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L + +YVGR + ER E++ + +R T N++VKN+ D IDDE+
Sbjct: 1 MNGVRL-NNRQVYVGRFKFPEERAAEVRTR------DRATF---TNVFVKNIGDDIDDEK 50
Query: 181 LRKEFAPFGTITSAKVM 231
L++ F +G S KV+
Sbjct: 51 LKELFCEYGPTESVKVI 67
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + + E A KAV +++G+ + K LYV AQ+K +R A L
Sbjct: 78 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAEL 120
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 99.1 bits (236), Expect = 1e-20
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
L+GK ++GK LYVGRAQKK ER EL+R+FE+L+ + +R GV +Y+KNLD+TI+DE+
Sbjct: 259 LHGKS-IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEK 317
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
L++EF+ FG+I+ AKVM+E G+ K
Sbjct: 318 LKEEFSSFGSISRAKVMMEVGQGK 341
Score = 57.6 bits (133), Expect = 5e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
G VCFSS EEATKAV EMNGRIVG+KPL+V L Q +
Sbjct: 344 GVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L + +YVGR + ER E++ + +R T N++VKN+ D IDDE+
Sbjct: 165 MNGVRL-NNRQVYVGRFKFPEERAAEVRTR------DRATF---TNVFVKNIGDDIDDEK 214
Query: 181 LRKEFAPFGTITSAKVM 231
L++ F +G S KV+
Sbjct: 215 LKELFCEYGPTESVKVI 231
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + + E A KAV +++G+ + K LYV AQ+K +R A L
Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAEL 284
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID+ L F+ FG I S KV+ +D K
Sbjct: 101 RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK 145
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 99.1 bits (236), Expect = 1e-20
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
L+GK ++GK LYVGRAQKK ER EL+R+FE+L+ + +R GV +Y+KNLD+TI+DE+
Sbjct: 244 LHGKS-IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEK 302
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
L++EF+ FG+I+ AKVM+E G+ K
Sbjct: 303 LKEEFSSFGSISRAKVMMEVGQGK 326
Score = 57.6 bits (133), Expect = 5e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
G VCFSS EEATKAV EMNGRIVG+KPL+V L Q +
Sbjct: 329 GVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 364
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L + +YVGR + ER E++ + +R T N++VKN+ D IDDE+
Sbjct: 150 MNGVRL-NNRQVYVGRFKFPEERAAEVRTR------DRATF---TNVFVKNIGDDIDDEK 199
Query: 181 LRKEFAPFGTITSAKVM 231
L++ F +G S KV+
Sbjct: 200 LKELFCEYGPTESVKVI 216
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + + E A KAV +++G+ + K LYV AQ+K +R A L
Sbjct: 227 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAEL 269
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID+ L F+ FG I S KV+ +D K
Sbjct: 86 RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK 130
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 99.1 bits (236), Expect = 1e-20
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
L+GK ++GK LYVGRAQKK ER EL+R+FE+L+ + +R GV +Y+KNLD+TI+DE+
Sbjct: 259 LHGKS-IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEK 317
Query: 181 LRKEFAPFGTITSAKVMLEDGRIK 252
L++EF+ FG+I+ AKVM+E G+ K
Sbjct: 318 LKEEFSSFGSISRAKVMMEVGQGK 341
Score = 57.6 bits (133), Expect = 5e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 364
G VCFSS EEATKAV EMNGRIVG+KPL+V L Q +
Sbjct: 344 GVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +1
Query: 1 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 180
+NG L + +YVGR + ER E++ + +R T N++VKN+ D IDDE+
Sbjct: 165 MNGVRL-NNRQVYVGRFKFPEERAAEVRTR------DRATF---TNVFVKNIGDDIDDEK 214
Query: 181 LRKEFAPFGTITSAKVM 231
L++ F +G S KV+
Sbjct: 215 LKELFCEYGPTESVKVI 231
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 385
GFV + + E A KAV +++G+ + K LYV AQ+K +R A L
Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAEL 284
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRIK 252
R GV N+++KNLD +ID+ L F+ FG I S KV+ +D K
Sbjct: 101 RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK 145
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 36.3 bits (80), Expect = 0.12
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
GFV F P + +A+ EMNG+ VG++P+ + + K+
Sbjct: 395 GFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKD 431
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 36.3 bits (80), Expect = 0.12
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
GFV F P + +A+ EMNG+ VG++P+ + + K+
Sbjct: 425 GFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKD 461
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 36.3 bits (80), Expect = 0.12
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
GFV F P + +A+ EMNG+ VG++P+ + + K+
Sbjct: 396 GFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKD 432
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 36.3 bits (80), Expect = 0.12
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
GFV F P + +A+ EMNG+ VG++P+ + + K+
Sbjct: 284 GFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKD 320
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 395 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 431
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 441 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 482
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 35.9 bits (79), Expect = 0.16
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL TID++ L F+ FG I S KV ++
Sbjct: 128 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDE 168
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKA 379
GFV F E A +A+ MNG + + ++V + ++R+A
Sbjct: 175 GFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREA 215
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 396 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 432
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 442 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 35.9 bits (79), Expect = 0.16
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL TID++ L F+ FG I S KV ++
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDE 125
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKA 379
GFV F E A +A+ MNG + + ++V + ++R+A
Sbjct: 132 GFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREA 172
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 35.9 bits (79), Expect = 0.16
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
R GV N+++KNL TID++ L F+ FG I S KV ++
Sbjct: 85 RKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDE 125
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKA 379
GFV F E A +A+ MNG + + ++V + ++R+A
Sbjct: 132 GFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREA 172
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 435
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 445 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 396 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 432
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 442 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 483
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 435
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 445 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 435
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 445 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 486
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 35.9 bits (79), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ L + F PFG + SAKV ++
Sbjct: 457 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFID 493
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 503 GFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY 544
>U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNOL3
protein.
Length = 490
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 403 EGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFID 439
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 449 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
>AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.21
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 422 EGANLFIYHLPQEFGDQHILQMFMPFGNVISAKVFID 458
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 468 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
>BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein.
Length = 521
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 480 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 521
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 434 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 470
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAK 225
R GV N+++KNLD +ID++ L F+ FG I S K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCK 129
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 121 RYQGV-NLYVKNLDDTIDDERLRKEFAPFGTITSAK 225
R GV N+++KNLD +ID++ L F+ FG I S K
Sbjct: 94 RKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCK 129
>AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 449 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 403 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 439
>AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 457 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 498
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 411 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 447
>AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 449 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 403 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 439
>AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 457 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 498
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 411 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 447
>AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma
apoptosis-related RNA-binding protein isoform 4 protein.
Length = 488
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 447 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 488
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 401 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 437
>AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 3 protein.
Length = 484
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 443 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 484
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 397 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 433
>AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 1 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 449 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 403 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 439
>AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 2 protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 468 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 509
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 422 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 458
>AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 508
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 467 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 508
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 421 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 457
>AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma
apoptosis-related RNA binding protein protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.28
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV + +P A A+ MNG +G K L V L + K D K +
Sbjct: 449 GFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 490
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D+ + + F PFG + SAKV ++
Sbjct: 403 EGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFID 439
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 252 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 307
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 317 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 358
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 359 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 414
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 424 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 122
Query: 217 SAKVM 231
V+
Sbjct: 123 ECTVL 127
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 301 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 356
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 366 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 407
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 358 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 413
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 423 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 464
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 122
Query: 217 SAKVM 231
V+
Sbjct: 123 ECTVL 127
>BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein.
Length = 368
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 281 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVD 317
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 327 GFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 368
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 394 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVD 430
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L L + K+ + +
Sbjct: 440 GFVSFDNPTSAQTAIQAMNGFQIGMKRLKAQLKRPKDANRPY 481
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 359 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 414
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 424 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 122
Query: 217 SAKVM 231
V+
Sbjct: 123 ECTVL 127
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 359 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 414
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 424 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 309 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 364
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 374 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 415
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 122
Query: 217 SAKVM 231
V+
Sbjct: 123 ECTVL 127
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 359 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 414
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 424 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 465
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 122
Query: 217 SAKVM 231
V+
Sbjct: 123 ECTVL 127
>AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 289 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVD 325
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 335 GFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 376
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 394 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVD 430
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 440 GFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 394 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVD 430
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 440 GFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 481
>AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein
BRUNOL1 protein.
Length = 140
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 34 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 89
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 99 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 140
>AB209434-1|BAD92671.1| 305|Homo sapiens BRUNO-like 6 RNA-binding
protein variant protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG + SAKV ++
Sbjct: 218 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVD 254
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 264 GFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 305
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 70 QKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
Q++ +++ +Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 335 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 390
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 400 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 441
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 39 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 98
Query: 217 SAKVM 231
V+
Sbjct: 99 ECTVL 103
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG I S+KV ++
Sbjct: 398 EGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 434
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
GFV F +P A A+ MNG +G K L V L + K+
Sbjct: 444 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 480
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG I S+KV ++
Sbjct: 398 EGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 434
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 367
GFV F +P A A+ MNG +G K L V L + K+
Sbjct: 444 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 480
>AF248649-1|AAF86231.1| 83|Homo sapiens RNA-binding protein
BRUNOL5 protein.
Length = 83
Score = 34.3 bits (75), Expect = 0.48
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 127 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+G NL++ +L D L + F PFG I S+KV ++
Sbjct: 3 EGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 39
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 352
GFV F +P A A+ MNG +G K L V L
Sbjct: 49 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQL 80
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.64
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 251 RLGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
R GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 405 REGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 448
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 33.9 bits (74), Expect = 0.64
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 567 KPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPP 728
+PS + A+A P A +T+R + +P T + VAA A++RPP
Sbjct: 704 QPSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPP 757
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 33.9 bits (74), Expect = 0.64
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +1
Query: 31 PLYVGRAQKKAERQKEL----KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFA 198
P+ Q+ E QKE+ KR ++ K E+LT GV +YV++L + +D+ ++ F+
Sbjct: 10 PILSLNPQEDVEFQKEVAQVRKRITQRKKQEQLT--PGV-VYVRHLPNLLDETQIFSYFS 66
Query: 199 PFGTIT 216
FGT+T
Sbjct: 67 QFGTVT 72
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 33.9 bits (74), Expect = 0.64
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +1
Query: 31 PLYVGRAQKKAERQKEL----KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFA 198
P+ Q+ E QKE+ KR ++ K E+LT GV +YV++L + +D+ ++ F+
Sbjct: 10 PILSLNPQEDVEFQKEVAQVRKRITQRKKQEQLT--PGV-VYVRHLPNLLDETQIFSYFS 66
Query: 199 PFGTIT 216
FGT+T
Sbjct: 67 QFGTVT 72
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 33.9 bits (74), Expect = 0.64
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM---LEDGRIKARVC 264
NLY+ N++ +++E L +EF FG + S K+M ++ R + R C
Sbjct: 273 NLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNC 318
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.64
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRIK 252
L VKNL + + +ER R+ FA FGT+T + +DG+ +
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFR 42
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 52 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 228
++ A+ + E+ + E G L++KNL+ +E+L++ F+ GT+ S +
Sbjct: 703 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSI 761
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 361
GFV + PE+A KA+ ++ G +V L V +++R
Sbjct: 777 GFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.64
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRIK 252
L VKNL + + +ER R+ FA FGT+T + +DG+ +
Sbjct: 4 LIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFR 42
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 52 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 228
++ A+ + E+ + E G L++KNL+ +E+L++ F+ GT+ S +
Sbjct: 703 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSI 761
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 361
GFV + PE+A KA+ ++ G +V L V +++R
Sbjct: 777 GFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
>AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.64
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 567 KPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPP 728
+PS + A+A P A +T+R + +P T + VAA A++RPP
Sbjct: 313 QPSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPP 366
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 33.9 bits (74), Expect = 0.64
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +1
Query: 31 PLYVGRAQKKAERQKEL----KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFA 198
P+ Q+ E QKE+ KR ++ K E+LT GV +YV++L + +D+ ++ F+
Sbjct: 10 PILSLNPQEDVEFQKEVAQVRKRITQRKKQEQLT--PGV-VYVRHLPNLLDETQIFSYFS 66
Query: 199 PFGTIT 216
FGT+T
Sbjct: 67 QFGTVT 72
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 33.9 bits (74), Expect = 0.64
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +1
Query: 31 PLYVGRAQKKAERQKEL----KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFA 198
P+ Q+ E QKE+ KR ++ K E+LT GV +YV++L + +D+ ++ F+
Sbjct: 10 PILSLNPQEDVEFQKEVAQVRKRITQRKKQEQLT--PGV-VYVRHLPNLLDETQIFSYFS 66
Query: 199 PFGTIT 216
FGT+T
Sbjct: 67 QFGTVT 72
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.64
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRIK 252
L VKNL + + +ER R+ FA FGT+T + +DG+ +
Sbjct: 17 LIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFR 55
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 52 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 228
++ A+ + E+ + E G L++KNL+ +E+L++ F+ GT+ S +
Sbjct: 716 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSI 774
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 361
GFV + PE+A KA+ ++ G +V L V +++R
Sbjct: 790 GFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 824
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 33.9 bits (74), Expect = 0.64
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM---LEDGRIKARVC 264
NLY+ N++ +++E L +EF FG + S K+M ++ R + R C
Sbjct: 274 NLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNC 319
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 33.5 bits (73), Expect = 0.84
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 567 KPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPP 728
+PS + A+A P A +T+R + +P T + VAA A++RPP
Sbjct: 2902 QPSVKPAAAKPAPAKPVAAKPVATKTATVRPPVAVKPATAAKPVAAKPAAVRPP 2955
>BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein
protein.
Length = 558
Score = 33.5 bits (73), Expect = 0.84
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 567 KPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPP 728
+PS + A+A P A +T+R + +P T + VAA A++RPP
Sbjct: 283 QPSVKPAAAKPAPAKPVAAKPVATKTATVRPPVAVKPATAAKPVAAKPAAVRPP 336
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 33.5 bits (73), Expect = 0.84
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 567 KPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPP 728
+PS + A+A P A +T+R + +P T + VAA A++RPP
Sbjct: 1427 QPSVKPAAAKPAPAKPVAAKPVATKTATVRPPVAVKPATAAKPVAAKPAAVRPP 1480
>X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein.
Length = 372
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 90 LKASGVQAQKAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 140
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 443 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 443 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
>AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 419
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 121 LKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGPVISTRIL 171
>AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ90115 fis, clone HEMBA1006770, weakly similar to
FLOWERING TIME CONTROL PROTEIN FCA. ).
Length = 484
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 443 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 484
>AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like
factor 4 protein.
Length = 486
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 445 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 486
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 421 GFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 462
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 94 EQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
+Q + ++ G N+++ +L D + + F PFG + SAKV ++
Sbjct: 364 QQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVD 411
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 46 RAQKKAERQKEL---KRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTIT 216
+AQ QK L R + ++ +R + L+V L DE +RK F PFGTI
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTID 122
Query: 217 SAKVM 231
V+
Sbjct: 123 ECTVL 127
>AF248651-1|AAF86233.1| 163|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 163
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 122 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 163
>AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA binding
protein variant protein.
Length = 510
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAH 382
GFV F +P A A+ MNG +G K L V L + K+ + +
Sbjct: 469 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 510
>X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein.
Length = 389
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 90 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 140
>D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein.
Length = 403
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 123 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 173
>BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein.
Length = 433
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 122 LKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRIL 172
>BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 123 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 173
>BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 123 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 173
>BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 123 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 173
>AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 122 LKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRIL 172
>AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein
protein.
Length = 411
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 113 LKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRIL 163
>AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein.
Length = 188
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 98 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRIL 148
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +3
Query: 558 APCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVS 737
AP PS AA A A P P P PA +T+ ARP G AA ++ PP +
Sbjct: 249 APAAPSPPAAPAPA--APAAAPPPPPPAPATL-----ARPPGHPAGPPTAAPAVPPPAAA 301
Query: 738 QSSRPA 755
Q+ A
Sbjct: 302 QNGGSA 307
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +3
Query: 558 APCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVS 737
AP PS AA A A P P P PA +T+ ARP G AA ++ PP +
Sbjct: 251 APAAPSPPAAPAPA--APAAAPPPPPPAPATL-----ARPPGHPAGPPTAAPAVPPPAAA 303
Query: 738 QSSRPA 755
Q+ A
Sbjct: 304 QNGGSA 309
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 56 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 92
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 56 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 92
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +3
Query: 558 APCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVS 737
AP PS AA A A P P P PA +T+ ARP G AA ++ PP +
Sbjct: 251 APAAPSPPAAPAPA--APAAAPPPPPPAPATL-----ARPPGHPAGPPTAAPAVPPPAAA 303
Query: 738 QSSRPA 755
Q+ A
Sbjct: 304 QNGGSA 309
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +3
Query: 558 APCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVS 737
AP PS AA A A P P P PA +T+ ARP G AA ++ PP +
Sbjct: 251 APAAPSPPAAPAPA--APAAAPPPPPPAPATL-----ARPPGHPAGPPTAAPAVPPPAAA 303
Query: 738 QSSRPA 755
Q+ A
Sbjct: 304 QNGGSA 309
>AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL049824-3|CAI19349.1| 171|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 171
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL035404-7|CAI19578.1| 171|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 171
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 296
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 314
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 130 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 240
G N+++ NLD ID++ L F+ FG I ++ D
Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRD 135
>AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 296
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein.
Length = 296
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 139 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
LYV L + +DD+ L F PFG IT ++ L+
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLD 40
>D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein.
Length = 285
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
NLY+ NL ++D++ L PFG + S +++
Sbjct: 8 NLYISNLPLSMDEQELENMLKPFGQVISTRIL 39
>D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein.
Length = 288
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 136 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
NLY+ NL ++D++ L PFG + S +++
Sbjct: 8 NLYISNLPLSMDEQELENMLKPFGQVISTRIL 39
>D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 117 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRIL 167
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +1
Query: 28 KPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFG 207
KP YV AQ+ A S + NLY++ L D+ L K P+G
Sbjct: 22 KP-YVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYG 80
Query: 208 TITSAKVMLE 237
I S K +L+
Sbjct: 81 KIVSTKAILD 90
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 358
GFV +S P +A KA+ +NG + TK + V+ A+
Sbjct: 74 GFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR 107
>BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 117 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRIL 167
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +1
Query: 28 KPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFG 207
KP YV AQ+ A S + NLY++ L D+ L K P+G
Sbjct: 22 KP-YVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYG 80
Query: 208 TITSAKVMLE 237
I S K +L+
Sbjct: 81 KIVSTKAILD 90
>BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D++ L PFG + S +++
Sbjct: 117 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRIL 167
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +1
Query: 28 KPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFG 207
KP YV AQ+ A S + NLY++ L D+ L K P+G
Sbjct: 22 KP-YVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYG 80
Query: 208 TITSAKVMLE 237
I S K +L+
Sbjct: 81 KIVSTKAILD 90
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 358
GFV +S P +A KA+ +NG + TK + V+ A+
Sbjct: 83 GFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR 116
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 257 GFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 358
GFV +S P +A KA+ +NG + TK + V+ A+
Sbjct: 34 GFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR 67
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
>D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein.
Length = 373
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 79 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 231
LK Q + + NLY+ NL ++D + L PFG + S +++
Sbjct: 90 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDKQELENMLKPFGQVISTRIL 140
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 93 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 228 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 133 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRIK 252
+ LYV +L I ++ LR F PFG I S ++M+ E GR K
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
>BC047235-1|AAH47235.1| 540|Homo sapiens upstream binding protein 1
(LBP-1a) protein.
Length = 540
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/78 (24%), Positives = 27/78 (34%)
Frame = +3
Query: 483 SLQHHVTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTS 662
+++H S Y + C P A +AY N P+ P +P QST
Sbjct: 283 AVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVP 342
Query: 663 LGARPITGQQGVAAAAAS 716
QG A+ S
Sbjct: 343 DSNSSSPNHQGDGASQTS 360
>AK096139-1|BAC04708.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ38820 fis, clone LIVER2008473. ).
Length = 182
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 575 HTSSICICKYATHLQTSTESSGPIYNKNIVRCKTHNWTARSCCCCCIYSSTFSISK 742
++SS C+ HL T ++ P+ +++ + + +W ++ CCC +T S++K
Sbjct: 80 YSSSSCMTIQIHHLTTLLDA--PLTHRSGMGPEILHWASKRCCCWSAGQTTLSVAK 133
>AF198487-1|AAF32274.1| 540|Homo sapiens transcription factor
LBP-1b protein.
Length = 540
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/78 (24%), Positives = 27/78 (34%)
Frame = +3
Query: 483 SLQHHVTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTS 662
+++H S Y + C P A +AY N P+ P +P QST
Sbjct: 283 AVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVP 342
Query: 663 LGARPITGQQGVAAAAAS 716
QG A+ S
Sbjct: 343 DSNSSSPNHQGDGASQTS 360
>AL591866-6|CAI16074.1| 405|Homo sapiens taste receptor, type 1,
member 1 protein.
Length = 405
Score = 25.0 bits (52), Expect(2) = 4.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +2
Query: 683 WTARSCCCCC 712
W CCCCC
Sbjct: 385 WQLTRCCCCC 394
Score = 24.6 bits (51), Expect(2) = 4.6
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 692 RSCCCCCI 715
R CCCCC+
Sbjct: 389 RCCCCCCL 396
>U63542-1|AAC51145.1| 252|Homo sapiens FAP protein protein.
Length = 252
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 277 RRKTDKPEPLYV-HLLALPSQT**SQMVQILCADVHHQLYH 158
RR KP+P H + P QM + L DVHHQ YH
Sbjct: 120 RRNNTKPKPFCCDHPPSYPLHFRLYQMEKTLSGDVHHQYYH 160
>BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein.
Length = 69
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 112 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 237
R R +L+V+N+ D E LR+EF +G I V L+
Sbjct: 3 RYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD 44
>AL606516-3|CAO72050.1| 417|Homo sapiens novel protein protein.
Length = 417
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 445 PA*WCKWIFCTIAPSSTTLLWTAQMTQIRPTT-PRWNAQPPVSLAHKQHLHMQI 603
P +C+ T+ + + W ++ + PTT P NA+ + HK H +M +
Sbjct: 334 PKMYCRKYKATLVIQTEEMYWKYEINGLTPTTVPPKNAKAKIDATHKTHDNMPV 387
>AL606467-3|CAI41432.1| 417|Homo sapiens novel protein protein.
Length = 417
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 445 PA*WCKWIFCTIAPSSTTLLWTAQMTQIRPTT-PRWNAQPPVSLAHKQHLHMQI 603
P +C+ T+ + + W ++ + PTT P NA+ + HK H +M +
Sbjct: 334 PKMYCRKYKATLVIQTEEMYWKYEINGLTPTTVPPKNAKAKIDATHKTHDNMPV 387
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 773 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 828
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 829 LTGSAGQPSAPSHAQPPLHGQ 849
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 505 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 560
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 561 LTGSAGQPSAPSHAQPPLHGQ 581
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 773 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 828
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 829 LTGSAGQPSAPSHAQPPLHGQ 849
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 505 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 560
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 561 LTGSAGQPSAPSHAQPPLHGQ 581
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 773 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 828
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 829 LTGSAGQPSAPSHAQPPLHGQ 849
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 202 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 257
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 258 LTGSAGQPSAPSHAQPPLHGQ 278
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 219 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 274
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 275 LTGSAGQPSAPSHAQPPLHGQ 295
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 219 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 274
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 275 LTGSAGQPSAPSHAQPPLHGQ 295
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 773 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 828
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 829 LTGSAGQPSAPSHAQPPLHGQ 849
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 498 VTMDSSNDSNKTYNSKVECTAPCKPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 677
V S +++ N TAP P T A A + P P+P P + L +P
Sbjct: 759 VPPQGSPTASQAPNQPQAPTAPV-PHTHIQQAPA-LHPQRPPSPHPPPHPSPHPPL--QP 814
Query: 678 ITGQQGVAAAAASIRPPLVSQ 740
+TG G +A + +PPL Q
Sbjct: 815 LTGSAGQPSAPSHAQPPLHGQ 835
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,554,635
Number of Sequences: 237096
Number of extensions: 2202338
Number of successful extensions: 7652
Number of sequences better than 10.0: 204
Number of HSP's better than 10.0 without gapping: 6431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7570
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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