Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0056
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 274 1e-73
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 274 1e-73
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 274 1e-73
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 274 2e-73
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 274 2e-73
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 274 2e-73
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 274 2e-73
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 274 2e-73
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 224 1e-58
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 198 7e-51
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 40 0.004
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 40 0.004
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 40 0.004
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 37 0.036
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 29 9.7
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (672), Expect = 1e-73
Identities = 126/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (672), Expect = 1e-73
Identities = 126/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (672), Expect = 1e-73
Identities = 126/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (671), Expect = 2e-73
Identities = 125/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 274 bits (671), Expect = 2e-73
Identities = 125/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (671), Expect = 2e-73
Identities = 125/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (671), Expect = 2e-73
Identities = 125/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 274 bits (671), Expect = 2e-73
Identities = 125/160 (78%), Positives = 142/160 (88%)
Frame = +3
Query: 36 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 215
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 216 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 395
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 396 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 160
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 224 bits (548), Expect = 1e-58
Identities = 102/130 (78%), Positives = 115/130 (88%)
Frame = +3
Query: 48 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 227
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 228 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 407
DPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRG 120
Query: 408 RLARASGNFA 437
+LARASGN+A
Sbjct: 121 KLARASGNYA 130
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 198 bits (484), Expect = 7e-51
Identities = 90/114 (78%), Positives = 101/114 (88%)
Frame = +3
Query: 174 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 353
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 354 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 515
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS 114
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 40.3 bits (90), Expect = 0.004
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 90 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 269
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 270 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 434
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 435 ATVI 446
++
Sbjct: 214 GVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 40.3 bits (90), Expect = 0.004
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 90 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 269
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 270 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 434
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 435 ATVI 446
++
Sbjct: 214 GVLL 217
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 40.3 bits (90), Expect = 0.004
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 90 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 269
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 270 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 434
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 435 ATVI 446
++
Sbjct: 214 GVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 37.1 bits (82), Expect = 0.036
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 246 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 410
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 411 LARASGNFATVI 446
RA+G ++
Sbjct: 203 YIRAAGTCGVLL 214
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +2
Query: 179 NP*PW*RCTFGCCTLPRSIQVQDKEGALHCSRRALHRPICLLWKESNS*SWKC 337
+P P RC C LP +Q + C P+CL + SW C
Sbjct: 268 SPRPMARCISRRCQLPHIASLQARSSPCTCDHLIPCLPLCLRLHGPGAPSWAC 320
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,050,582
Number of Sequences: 237096
Number of extensions: 1835500
Number of successful extensions: 3434
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3434
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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