Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40059
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha pro... 40 0.003
X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha pro... 40 0.003
M11744-1|AAA28526.1| 463|Drosophila melanogaster protein ( D.me... 40 0.003
BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p pro... 40 0.003
BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p pro... 40 0.003
AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD... 40 0.003
AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC... 40 0.003
AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB... 40 0.003
AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA... 40 0.003
AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB... 40 0.003
AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA... 40 0.003
BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p pro... 32 0.86
AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA ... 32 0.86
AY070892-1|AAL48514.1| 135|Drosophila melanogaster LP01106p pro... 30 3.5
BT001870-1|AAN71641.1| 2053|Drosophila melanogaster SD05534p pro... 29 6.0
AE013599-3786|AAF47145.2| 2053|Drosophila melanogaster CG3173-PA... 29 6.0
>X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha
protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha
protein.
Length = 463
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>M11744-1|AAA28526.1| 463|Drosophila melanogaster protein (
D.melanogaster 50 kDaprotein F1 gene, complete cds. ).
Length = 463
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p
protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p
protein.
Length = 463
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD,
isoform D protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC,
isoform C protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB,
isoform B protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA,
isoform A protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB,
isoform B protein.
Length = 463
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA,
isoform A protein.
Length = 463
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 720 GQEKTHLYIVVIGHATPGRSTTTGSFVLPNVGGI 821
G+EK H+ IVVIGH G+STTTG + GGI
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIY-KCGGI 34
>BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p
protein.
Length = 670
Score = 32.3 bits (70), Expect = 0.86
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 726 EKTHLYIVVIGHATPGRSTTTGSFVLPNVGGIGQ 827
+K+H++++VIGH G+ST G +L + G + Q
Sbjct: 244 QKSHIHMIVIGHVDAGKSTLMG-HLLYDTGNVSQ 276
>AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA
protein.
Length = 670
Score = 32.3 bits (70), Expect = 0.86
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 726 EKTHLYIVVIGHATPGRSTTTGSFVLPNVGGIGQ 827
+K+H++++VIGH G+ST G +L + G + Q
Sbjct: 244 QKSHIHMIVIGHVDAGKSTLMG-HLLYDTGNVSQ 276
>AY070892-1|AAL48514.1| 135|Drosophila melanogaster LP01106p
protein.
Length = 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 804 VGQMTQWWWTCRESRAR*RQCK 739
VG + W+W C R RQCK
Sbjct: 34 VGVQSTWYWVCESDREEERQCK 55
>BT001870-1|AAN71641.1| 2053|Drosophila melanogaster SD05534p
protein.
Length = 2053
Score = 29.5 bits (63), Expect = 6.0
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Frame = +2
Query: 62 LQITLTKFWIVNCVLVKFVQGN*PVSMF--KSLNALDDEISNVF-------SHCISTRLV 214
L I+ + WI N LVKF Q F K N D+E+ V I+ +
Sbjct: 343 LSISRLELWIHNGKLVKFAQQLLSYICFNIKGRNTQDNEVLLVLVKMRLKTKPLINHYMS 402
Query: 215 CKKELIFYYPSIIS 256
C KE+IF P I+S
Sbjct: 403 CLKEMIFLQPEILS 416
>AE013599-3786|AAF47145.2| 2053|Drosophila melanogaster CG3173-PA
protein.
Length = 2053
Score = 29.5 bits (63), Expect = 6.0
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Frame = +2
Query: 62 LQITLTKFWIVNCVLVKFVQGN*PVSMF--KSLNALDDEISNVF-------SHCISTRLV 214
L I+ + WI N LVKF Q F K N D+E+ V I+ +
Sbjct: 343 LSISRLELWIHNGKLVKFAQQLLSYICFNIKGRNTQDNEVLLVLVKMRLKTKPLINHYMS 402
Query: 215 CKKELIFYYPSIIS 256
C KE+IF P I+S
Sbjct: 403 CLKEMIFLQPEILS 416
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,478,334
Number of Sequences: 53049
Number of extensions: 743598
Number of successful extensions: 1677
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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