Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40045
         (882 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113377-1|AAM29382.1|  431|Drosophila melanogaster RE01730p pro...    30   4.9  
AY060922-1|AAL28470.1|  430|Drosophila melanogaster GM06507p pro...    30   4.9  
AE013599-3358|AAM68213.1|  431|Drosophila melanogaster CG3074-PB...    30   4.9  
AE013599-3357|AAF46818.2|  431|Drosophila melanogaster CG3074-PA...    30   4.9  

>AY113377-1|AAM29382.1|  431|Drosophila melanogaster RE01730p
           protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   YFRIARGHSGTGIESSVLTVLPYV 74
           YFRI RG +  GIE  VL   PYV
Sbjct: 399 YFRILRGSNECGIEEYVLASWPYV 422


>AY060922-1|AAL28470.1|  430|Drosophila melanogaster GM06507p
           protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   YFRIARGHSGTGIESSVLTVLPYV 74
           YFRI RG +  GIE  VL   PYV
Sbjct: 398 YFRILRGSNECGIEEYVLASWPYV 421


>AE013599-3358|AAM68213.1|  431|Drosophila melanogaster CG3074-PB,
           isoform B protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   YFRIARGHSGTGIESSVLTVLPYV 74
           YFRI RG +  GIE  VL   PYV
Sbjct: 399 YFRILRGSNECGIEEYVLASWPYV 422


>AE013599-3357|AAF46818.2|  431|Drosophila melanogaster CG3074-PA,
           isoform A protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   YFRIARGHSGTGIESSVLTVLPYV 74
           YFRI RG +  GIE  VL   PYV
Sbjct: 399 YFRILRGSNECGIEEYVLASWPYV 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,335,076
Number of Sequences: 53049
Number of extensions: 479024
Number of successful extensions: 765
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)