Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30034
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M21045-2|AAA28853.1|  151|Drosophila melanogaster protein ( D.me...   160   1e-39
M21045-1|AAA28852.1|  151|Drosophila melanogaster protein ( D.me...   160   1e-39
AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p pro...   160   1e-39
AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA...   160   1e-39
AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB...   160   1e-39
AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA...   160   1e-39
AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...   137   1e-32
AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...    58   1e-08
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...    58   1e-08
AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    48   1e-05
AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p pro...    32   0.86 
AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA...    32   0.86 
AE014298-778|AAF46065.2| 1059|Drosophila melanogaster CG4096-PA ...    30   3.5  

>M21045-2|AAA28853.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDEASPYAAMLAAQDVAEKCKTLGI
Sbjct: 63  KADRDEASPYAAMLAAQDVAEKCKTLGI 90



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ         SMKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140


>M21045-1|AAA28852.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDEASPYAAMLAAQDVAEKCKTLGI
Sbjct: 63  KADRDEASPYAAMLAAQDVAEKCKTLGI 90



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ         SMKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140


>AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p
           protein.
          Length = 151

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDEASPYAAMLAAQDVAEKCKTLGI
Sbjct: 63  KADRDEASPYAAMLAAQDVAEKCKTLGI 90



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ         SMKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140


>AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA
           protein.
          Length = 151

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDEASPYAAMLAAQDVAEKCKTLGI
Sbjct: 63  KADRDEASPYAAMLAAQDVAEKCKTLGI 90



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ         SMKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140


>AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB,
           isoform B protein.
          Length = 151

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDEASPYAAMLAAQDVAEKCKTLGI
Sbjct: 63  KADRDEASPYAAMLAAQDVAEKCKTLGI 90



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ         SMKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140


>AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA,
           isoform A protein.
          Length = 151

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 80/88 (90%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDEASPYAAMLAAQDVAEKCKTLGI
Sbjct: 63  KADRDEASPYAAMLAAQDVAEKCKTLGI 90



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ         SMKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140


>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score =  137 bits (332), Expect = 1e-32
 Identities = 71/105 (67%), Positives = 76/105 (72%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3   PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGIRPCT*SSVLLVETKQRP 205
           KADRDEASPYAAM   +      +   + PC  S V    T+ RP
Sbjct: 63  KADRDEASPYAAMSPLRMWLRSARHWALLPCILSCVPPAATRPRP 107


>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           KCE ++LM+RNPRKVTWTVLYRRK +KG EE
Sbjct: 35  KCERSYLMKRNPRKVTWTVLYRRKHRKGIEE 65


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           KCE ++LM+RNPRKVTWTVLYRRK +KG EE
Sbjct: 35  KCERSYLMKRNPRKVTWTVLYRRKHRKGIEE 65


>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +2

Query: 572 MRRNPRKVTWTVLYRRKFKKGQEE 643
           M+RNPRKVTWTVLYRRK +KG EE
Sbjct: 1   MKRNPRKVTWTVLYRRKHRKGIEE 24


>AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p
           protein.
          Length = 191

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRR 619
           KC  A   ++NPRKV WT  YR+
Sbjct: 35  KCHKAFKRKKNPRKVGWTKAYRK 57


>AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA
           protein.
          Length = 191

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRR 619
           KC  A   ++NPRKV WT  YR+
Sbjct: 35  KCHKAFKRKKNPRKVGWTKAYRK 57


>AE014298-778|AAF46065.2| 1059|Drosophila melanogaster CG4096-PA
            protein.
          Length = 1059

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = -2

Query: 311  TLLCWRHRM*QRNXXXXXXXXXXXAPCYWWKQNKDPWSWCSV 186
            TL CW H   +R             P +WW     PW +C V
Sbjct: 967  TLPCWTHAKNKRPARQSRGCGDQPCPAHWW---PGPWQFCPV 1005


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,653,994
Number of Sequences: 53049
Number of extensions: 689708
Number of successful extensions: 1680
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)