Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20129
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 155 4e-38
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 154 1e-37
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 154 1e-37
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 154 1e-37
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 154 1e-37
AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p pro... 31 2.1
AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-P... 31 2.1
M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up prote... 30 3.7
AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p pro... 30 3.7
AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-P... 30 3.7
AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-P... 30 3.7
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro... 29 6.4
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P... 29 6.4
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 155 bits (377), Expect = 4e-38
Identities = 72/94 (76%), Positives = 82/94 (87%)
Frame = +1
Query: 235 LGWD*YLNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD 414
+G D + N KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+
Sbjct: 60 VGIDIFSN-KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPE 118
Query: 415 GDLGTQLRTDFDSGKELLCTVLKSCGEECVIASK 516
G+LG QLR DFDSGK+LLCTVLK+CGEECVIA K
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 121 bits (291), Expect = 1e-27
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +2
Query: 59 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 238
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 239 VGIDI 253
VGIDI
Sbjct: 60 VGIDI 64
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 154 bits (373), Expect = 1e-37
Identities = 71/94 (75%), Positives = 82/94 (87%)
Frame = +1
Query: 235 LGWD*YLNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD 414
+G D + N KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+
Sbjct: 60 VGIDIFSN-KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 415 GDLGTQLRTDFDSGKELLCTVLKSCGEECVIASK 516
G+LG QLR DFDSGK+LLCTVLK+CGEECVIA K
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 118 bits (283), Expect = 1e-26
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +2
Query: 59 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 238
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 239 VGIDI 253
VGIDI
Sbjct: 60 VGIDI 64
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 154 bits (373), Expect = 1e-37
Identities = 71/94 (75%), Positives = 82/94 (87%)
Frame = +1
Query: 235 LGWD*YLNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD 414
+G D + N KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+
Sbjct: 60 VGIDIFSN-KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 415 GDLGTQLRTDFDSGKELLCTVLKSCGEECVIASK 516
G+LG QLR DFDSGK+LLCTVLK+CGEECVIA K
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 121 bits (291), Expect = 1e-27
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +2
Query: 59 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 238
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 239 VGIDI 253
VGIDI
Sbjct: 60 VGIDI 64
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 154 bits (373), Expect = 1e-37
Identities = 71/94 (75%), Positives = 82/94 (87%)
Frame = +1
Query: 235 LGWD*YLNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD 414
+G D + N KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+
Sbjct: 60 VGIDIFSN-KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 415 GDLGTQLRTDFDSGKELLCTVLKSCGEECVIASK 516
G+LG QLR DFDSGK+LLCTVLK+CGEECVIA K
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 118 bits (283), Expect = 1e-26
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +2
Query: 59 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 238
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 239 VGIDI 253
VGIDI
Sbjct: 60 VGIDI 64
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 154 bits (373), Expect = 1e-37
Identities = 71/94 (75%), Positives = 82/94 (87%)
Frame = +1
Query: 235 LGWD*YLNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD 414
+G D + N KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+
Sbjct: 60 VGIDIFSN-KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 415 GDLGTQLRTDFDSGKELLCTVLKSCGEECVIASK 516
G+LG QLR DFDSGK+LLCTVLK+CGEECVIA K
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
Score = 118 bits (283), Expect = 1e-26
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +2
Query: 59 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 238
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 239 VGIDI 253
VGIDI
Sbjct: 60 VGIDI 64
>AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 210 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 58
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-PA
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 210 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 58
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up protein
type 1 protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 236 LVGIDISMVKSMKISVPPHTTWTYP 310
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p
protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 236 LVGIDISMVKSMKISVPPHTTWTYP 310
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-PA,
isoform A protein.
Length = 746
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 236 LVGIDISMVKSMKISVPPHTTWTYP 310
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-PB,
isoform B protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 236 LVGIDISMVKSMKISVPPHTTWTYP 310
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
protein.
Length = 1019
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 155 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 72
RNR+Y W +W RPR LR+++V L
Sbjct: 26 RNRWYLFS--CWRKWFRPRELRARTVNL 51
>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
isoform A protein.
Length = 1087
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 155 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 72
RNR+Y W +W RPR LR+++V L
Sbjct: 26 RNRWYLFS--CWRKWFRPRELRARTVNL 51
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,513,357
Number of Sequences: 53049
Number of extensions: 803050
Number of successful extensions: 2630
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2627
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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