Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00041
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13806-1|BAA02964.1| 994|Drosophila melanogaster poly(ADP-ribos... 100 5e-21
BT015238-1|AAT94467.1| 994|Drosophila melanogaster RE04933p pro... 100 5e-21
AY118947-1|AAM50807.1| 557|Drosophila melanogaster LD31274p pro... 100 5e-21
AF533701-1|AAM93435.1| 613|Drosophila melanogaster PARP-E prote... 100 5e-21
AF051548-1|AAC24518.1| 994|Drosophila melanogaster poly(ADP-rib... 100 5e-21
BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p pro... 30 4.4
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB... 30 4.4
>D13806-1|BAA02964.1| 994|Drosophila melanogaster poly(ADP-ribose)
polymerase protein.
Length = 994
Score = 99.5 bits (237), Expect = 5e-21
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 254 LYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKL 433
+Y KS + K++DG AVDP S L++ HVY D YSVVL L D+ KNS+YK+
Sbjct: 497 IYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDS-NNKYSVVLGLTDIQRNKNSYYKV 555
Query: 434 QILKHNKENRYWLFRSWGRIGTTIGAVK 517
Q+LK +K+ +YW+FRSWGRIGT IG K
Sbjct: 556 QLLKADKKEKYWIFRSWGRIGTNIGNSK 583
Score = 58.8 bits (136), Expect = 8e-09
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 NDRRSKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNE--TK 672
N SK+E+ ++A F+ +Y +KT N ++ R+NFVK GR +P+EI Y D++ K
Sbjct: 578 NIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVK 637
Query: 673 TLTVDPKCELAEPVQRLIVTIFDIHYMKQT 762
+ +L VQ LI IFDI M +T
Sbjct: 638 HESHFFTSKLEISVQNLIKLIFDIDSMNKT 667
Score = 45.6 bits (103), Expect = 8e-05
Identities = 21/72 (29%), Positives = 43/72 (59%)
Frame = +3
Query: 3 EATVAVISTKADVDKMSPKMQSIQYLDIVVLDESFLNSIDPETGTVARSLELMKEYNIAD 182
E T+A+IST+ ++ K S +M+ + L I ++ FL+ ++ +T +++ + I
Sbjct: 419 ENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEADT---EGAIKYINSTCICS 475
Query: 183 WGIDPASKLPQD 218
WG DP S++P++
Sbjct: 476 WGTDPKSRIPKE 487
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 762 LLEFELDTEKMPLGKLS 812
L+EF +D +KMPLGKLS
Sbjct: 668 LMEFHIDMDKMPLGKLS 684
>BT015238-1|AAT94467.1| 994|Drosophila melanogaster RE04933p
protein.
Length = 994
Score = 99.5 bits (237), Expect = 5e-21
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 254 LYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKL 433
+Y KS + K++DG AVDP S L++ HVY D YSVVL L D+ KNS+YK+
Sbjct: 497 IYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDS-NNKYSVVLGLTDIQRNKNSYYKV 555
Query: 434 QILKHNKENRYWLFRSWGRIGTTIGAVK 517
Q+LK +K+ +YW+FRSWGRIGT IG K
Sbjct: 556 QLLKADKKEKYWIFRSWGRIGTNIGNSK 583
Score = 58.8 bits (136), Expect = 8e-09
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 NDRRSKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNE--TK 672
N SK+E+ ++A F+ +Y +KT N ++ R+NFVK GR +P+EI Y D++ K
Sbjct: 578 NIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVK 637
Query: 673 TLTVDPKCELAEPVQRLIVTIFDIHYMKQT 762
+ +L VQ LI IFDI M +T
Sbjct: 638 HESHFFTSKLEISVQNLIKLIFDIDSMNKT 667
Score = 45.6 bits (103), Expect = 8e-05
Identities = 21/72 (29%), Positives = 43/72 (59%)
Frame = +3
Query: 3 EATVAVISTKADVDKMSPKMQSIQYLDIVVLDESFLNSIDPETGTVARSLELMKEYNIAD 182
E T+A+IST+ ++ K S +M+ + L I ++ FL+ ++ +T +++ + I
Sbjct: 419 ENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEADT---EGAIKYINSTCICS 475
Query: 183 WGIDPASKLPQD 218
WG DP S++P++
Sbjct: 476 WGTDPKSRIPKE 487
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 762 LLEFELDTEKMPLGKLS 812
L+EF +D +KMPLGKLS
Sbjct: 668 LMEFHIDMDKMPLGKLS 684
>AY118947-1|AAM50807.1| 557|Drosophila melanogaster LD31274p
protein.
Length = 557
Score = 99.5 bits (237), Expect = 5e-21
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 254 LYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKL 433
+Y KS + K++DG AVDP S L++ HVY D YSVVL L D+ KNS+YK+
Sbjct: 60 IYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDS-NNKYSVVLGLTDIQRNKNSYYKV 118
Query: 434 QILKHNKENRYWLFRSWGRIGTTIGAVK 517
Q+LK +K+ +YW+FRSWGRIGT IG K
Sbjct: 119 QLLKADKKEKYWIFRSWGRIGTNIGNSK 146
Score = 58.8 bits (136), Expect = 8e-09
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 NDRRSKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNE--TK 672
N SK+E+ ++A F+ +Y +KT N ++ R+NFVK GR +P+EI Y D++ K
Sbjct: 141 NIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVK 200
Query: 673 TLTVDPKCELAEPVQRLIVTIFDIHYMKQT 762
+ +L VQ LI IFDI M +T
Sbjct: 201 HESHFFTSKLEISVQNLIKLIFDIDSMNKT 230
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 762 LLEFELDTEKMPLGKLS 812
L+EF +D +KMPLGKLS
Sbjct: 231 LMEFHIDMDKMPLGKLS 247
>AF533701-1|AAM93435.1| 613|Drosophila melanogaster PARP-E protein
protein.
Length = 613
Score = 99.5 bits (237), Expect = 5e-21
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 254 LYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKL 433
+Y KS + K++DG AVDP S L++ HVY D YSVVL L D+ KNS+YK+
Sbjct: 497 IYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDS-NNKYSVVLGLTDIQRNKNSYYKV 555
Query: 434 QILKHNKENRYWLFRSWGRIGTTIGAVK 517
Q+LK +K+ +YW+FRSWGRIGT IG K
Sbjct: 556 QLLKADKKEKYWIFRSWGRIGTNIGNSK 583
Score = 45.6 bits (103), Expect = 8e-05
Identities = 21/72 (29%), Positives = 43/72 (59%)
Frame = +3
Query: 3 EATVAVISTKADVDKMSPKMQSIQYLDIVVLDESFLNSIDPETGTVARSLELMKEYNIAD 182
E T+A+IST+ ++ K S +M+ + L I ++ FL+ ++ +T +++ + I
Sbjct: 419 ENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEADT---EGAIKYINSTCICS 475
Query: 183 WGIDPASKLPQD 218
WG DP S++P++
Sbjct: 476 WGTDPKSRIPKE 487
>AF051548-1|AAC24518.1| 994|Drosophila melanogaster
poly(ADP-ribose) polymerase protein.
Length = 994
Score = 99.5 bits (237), Expect = 5e-21
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 254 LYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKL 433
+Y KS + K++DG AVDP S L++ HVY D YSVVL L D+ KNS+YK+
Sbjct: 497 IYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDS-NNKYSVVLGLTDIQRNKNSYYKV 555
Query: 434 QILKHNKENRYWLFRSWGRIGTTIGAVK 517
Q+LK +K+ +YW+FRSWGRIGT IG K
Sbjct: 556 QLLKADKKEKYWIFRSWGRIGTNIGNSK 583
Score = 58.8 bits (136), Expect = 8e-09
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 NDRRSKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIPGRYFPLEIDYGDNE--TK 672
N SK+E+ ++A F+ +Y +KT N ++ R+NFVK GR +P+EI Y D++ K
Sbjct: 578 NIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVK 637
Query: 673 TLTVDPKCELAEPVQRLIVTIFDIHYMKQT 762
+ +L VQ LI IFDI M +T
Sbjct: 638 HESHFFTSKLEISVQNLIKLIFDIDSMNKT 667
Score = 45.6 bits (103), Expect = 8e-05
Identities = 21/72 (29%), Positives = 43/72 (59%)
Frame = +3
Query: 3 EATVAVISTKADVDKMSPKMQSIQYLDIVVLDESFLNSIDPETGTVARSLELMKEYNIAD 182
E T+A+IST+ ++ K S +M+ + L I ++ FL+ ++ +T +++ + I
Sbjct: 419 ENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEADT---EGAIKYINSTCICS 475
Query: 183 WGIDPASKLPQD 218
WG DP S++P++
Sbjct: 476 WGTDPKSRIPKE 487
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 762 LLEFELDTEKMPLGKLS 812
L+EF +D +KMPLGKLS
Sbjct: 668 LMEFHIDMDKMPLGKLS 684
>BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p
protein.
Length = 78
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 482 TNGTTSICSLYYVSRSAVCRKSSSERQHQRARARPSTLFC 363
T GTTS + + + +CR+ + H+R R+ PS L C
Sbjct: 2 TKGTTSFGKRHNKTHT-ICRRCGNSSYHRRNRSAPSRLSC 40
>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
protein.
Length = 2893
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = -2
Query: 666 LIVTVVYFQREVSPRNLDKVIPVFPTVLSFFFVQRLESVQSVIEIFHLLDFTAPIVVPIR 487
+++++V E N ++IP+ PT++ V R+ V ++++ + + V+
Sbjct: 2240 VLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQAL 2299
Query: 486 PHERNNQYLFSLLCFKICSL 427
P N LF LL F +L
Sbjct: 2300 PQVGNLGLLFFLLFFIFAAL 2319
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,753,107
Number of Sequences: 53049
Number of extensions: 678580
Number of successful extensions: 2213
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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