Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00039
(710 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p pro... 125 7e-29
AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p pro... 125 7e-29
AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-bind... 125 7e-29
AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,... 125 7e-29
AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,... 125 7e-29
L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding pr... 124 1e-28
L23873-1|AAA28862.1| 48|Drosophila melanogaster Rox2 protein. 56 5e-08
M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 36 0.054
M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 36 0.054
M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 36 0.054
M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 36 0.054
M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 36 0.054
AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 36 0.054
AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 36 0.054
AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 36 0.054
AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 36 0.054
AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 36 0.054
AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 36 0.054
AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 36 0.054
AY118842-1|AAM50702.1| 435|Drosophila melanogaster GM13065p pro... 33 0.38
AY095099-1|AAM11427.1| 984|Drosophila melanogaster SD09402p pro... 33 0.38
AE014296-288|AAF47514.1| 985|Drosophila melanogaster CG7879-PB,... 33 0.38
AE014296-287|AAF47513.1| 985|Drosophila melanogaster CG7879-PA,... 33 0.38
AE014134-2808|AAF53587.1| 435|Drosophila melanogaster CG12288-P... 33 0.38
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 33 0.51
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 33 0.51
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 33 0.51
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 32 0.88
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 32 0.88
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 32 0.88
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 32 0.88
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 32 0.88
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 32 0.88
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 32 0.88
L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprot... 31 1.5
L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprot... 31 1.5
BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p pro... 31 1.5
AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p pro... 31 1.5
AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p pro... 31 1.5
AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding ... 31 1.5
AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE... 31 1.5
AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD... 31 1.5
AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI... 31 1.5
AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH... 31 1.5
AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF... 31 1.5
AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB... 31 1.5
AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG... 31 1.5
AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC... 31 1.5
AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA... 31 1.5
AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-P... 31 1.5
AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA... 31 1.5
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 31 2.0
BT023584-1|AAY84984.1| 291|Drosophila melanogaster IP09423p pro... 31 2.0
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 31 2.0
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 31 2.0
AE014296-1944|AAF50069.1| 291|Drosophila melanogaster CG11726-P... 31 2.0
AE013599-3954|AAF47270.1| 250|Drosophila melanogaster CG3594-PA... 31 2.0
BT001728-1|AAN71483.1| 470|Drosophila melanogaster RE70333p pro... 30 2.7
AE014296-817|AAF47879.2| 470|Drosophila melanogaster CG1316-PA ... 30 2.7
X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein pr... 30 3.6
M33496-2|AAA03215.1| 698|Drosophila melanogaster protein ( D.me... 30 3.6
M33496-1|AAA03214.1| 700|Drosophila melanogaster protein ( D.me... 30 3.6
AY119651-1|AAM50305.1| 700|Drosophila melanogaster RE58280p pro... 30 3.6
AE014298-2380|AAX52501.1| 698|Drosophila melanogaster CG4211-PC... 30 3.6
AE014298-2379|AAF48597.2| 700|Drosophila melanogaster CG4211-PA... 30 3.6
AE014298-2378|AAN09398.1| 742|Drosophila melanogaster CG4211-PB... 30 3.6
X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein. 29 4.7
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 29 4.7
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 29 4.7
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 29 4.7
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 29 4.7
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 29 4.7
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 29 4.7
BT001519-1|AAN71274.1| 304|Drosophila melanogaster LP11802p pro... 29 6.2
AE014297-4090|AAN14403.1| 862|Drosophila melanogaster CG31064-P... 29 6.2
X62638-1|CAA44504.1| 345|Drosophila melanogaster hrp40.2 protein. 29 8.2
X62637-1|CAA44503.1| 321|Drosophila melanogaster hrp40.1 protein. 29 8.2
S62100-1|AAB26989.1| 308|Drosophila melanogaster SqdB protein. 29 8.2
S61875-1|AAB26988.1| 321|Drosophila melanogaster SqdA protein. 29 8.2
BT023832-1|AAZ86753.1| 308|Drosophila melanogaster LD29474p pro... 29 8.2
AY118501-1|AAM49870.1| 321|Drosophila melanogaster LD09691p pro... 29 8.2
AY113495-1|AAM29500.1| 330|Drosophila melanogaster RE53017p pro... 29 8.2
AY071251-1|AAL48873.1| 330|Drosophila melanogaster RE29010p pro... 29 8.2
AE014297-1708|AAF54964.2| 321|Drosophila melanogaster CG16901-P... 29 8.2
AE014297-1706|AAF54963.2| 344|Drosophila melanogaster CG16901-P... 29 8.2
AE014297-1705|AAN13570.1| 308|Drosophila melanogaster CG16901-P... 29 8.2
AE014296-2206|AAN11866.1| 430|Drosophila melanogaster CG10948-P... 29 8.2
AE014296-2205|AAN11865.1| 437|Drosophila melanogaster CG10948-P... 29 8.2
AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-P... 29 8.2
>AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p
protein.
Length = 224
Score = 125 bits (301), Expect = 7e-29
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 264 PDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYV 443
P+L AIKARV+EMEEEAEK+KQMQ+EVDKQM+ GS GL + + +S+EEK E D RSVYV
Sbjct: 42 PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAT-VPLSLEEKQEIDTRSVYV 100
Query: 444 GNVDYGATAEELEQHFHGCGSI 509
GNVDYGA+AEELE HFHGCG+I
Sbjct: 101 GNVDYGASAEELEAHFHGCGTI 122
Score = 109 bits (263), Expect = 3e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTN 688
NRVTILCNK DGHPKGFAYIEFG K+ V+TA+AM+E+LFRGR IKVM KRTN+PGLS+TN
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 689 R 691
R
Sbjct: 183 R 183
>AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p
protein.
Length = 224
Score = 125 bits (301), Expect = 7e-29
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 264 PDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYV 443
P+L AIKARV+EMEEEAEK+KQMQ+EVDKQM+ GS GL + + +S+EEK E D RSVYV
Sbjct: 42 PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAT-VPLSLEEKQEIDTRSVYV 100
Query: 444 GNVDYGATAEELEQHFHGCGSI 509
GNVDYGA+AEELE HFHGCG+I
Sbjct: 101 GNVDYGASAEELEAHFHGCGTI 122
Score = 109 bits (263), Expect = 3e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTN 688
NRVTILCNK DGHPKGFAYIEFG K+ V+TA+AM+E+LFRGR IKVM KRTN+PGLS+TN
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 689 R 691
R
Sbjct: 183 R 183
>AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-binding
protein II protein.
Length = 224
Score = 125 bits (301), Expect = 7e-29
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 264 PDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYV 443
P+L AIKARV+EMEEEAEK+KQMQ+EVDKQM+ GS GL + + +S+EEK E D RSVYV
Sbjct: 42 PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAT-VPLSLEEKQEIDTRSVYV 100
Query: 444 GNVDYGATAEELEQHFHGCGSI 509
GNVDYGA+AEELE HFHGCG+I
Sbjct: 101 GNVDYGASAEELEAHFHGCGTI 122
Score = 109 bits (263), Expect = 3e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTN 688
NRVTILCNK DGHPKGFAYIEFG K+ V+TA+AM+E+LFRGR IKVM KRTN+PGLS+TN
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 689 R 691
R
Sbjct: 183 R 183
>AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,
isoform B protein.
Length = 224
Score = 125 bits (301), Expect = 7e-29
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 264 PDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYV 443
P+L AIKARV+EMEEEAEK+KQMQ+EVDKQM+ GS GL + + +S+EEK E D RSVYV
Sbjct: 42 PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAT-VPLSLEEKQEIDTRSVYV 100
Query: 444 GNVDYGATAEELEQHFHGCGSI 509
GNVDYGA+AEELE HFHGCG+I
Sbjct: 101 GNVDYGASAEELEAHFHGCGTI 122
Score = 109 bits (263), Expect = 3e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTN 688
NRVTILCNK DGHPKGFAYIEFG K+ V+TA+AM+E+LFRGR IKVM KRTN+PGLS+TN
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 689 R 691
R
Sbjct: 183 R 183
>AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,
isoform A protein.
Length = 224
Score = 125 bits (301), Expect = 7e-29
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +3
Query: 264 PDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYV 443
P+L AIKARV+EMEEEAEK+KQMQ+EVDKQM+ GS GL + + +S+EEK E D RSVYV
Sbjct: 42 PELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAT-VPLSLEEKQEIDTRSVYV 100
Query: 444 GNVDYGATAEELEQHFHGCGSI 509
GNVDYGA+AEELE HFHGCG+I
Sbjct: 101 GNVDYGASAEELEAHFHGCGTI 122
Score = 109 bits (263), Expect = 3e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTN 688
NRVTILCNK DGHPKGFAYIEFG K+ V+TA+AM+E+LFRGR IKVM KRTN+PGLS+TN
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 689 R 691
R
Sbjct: 183 R 183
>L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding
protein protein.
Length = 224
Score = 124 bits (299), Expect = 1e-28
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +3
Query: 264 PDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYV 443
P+L AIKARV+EMEEEAEK+KQMQ+EVDKQM GS GL + + +S+EEK E D RSVYV
Sbjct: 42 PELEAIKARVKEMEEEAEKIKQMQSEVDKQMRGGSTTGLAT-VPLSLEEKQEIDTRSVYV 100
Query: 444 GNVDYGATAEELEQHFHGCGSI 509
GNVDYGA+AEELE HFHGCG+I
Sbjct: 101 GNVDYGASAEELEAHFHGCGTI 122
Score = 109 bits (263), Expect = 3e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTN 688
NRVTILCNK DGHPKGFAYIEFG K+ V+TA+AM+E+LFRGR IKVM KRTN+PGLS+TN
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 689 R 691
R
Sbjct: 183 R 183
>L23873-1|AAA28862.1| 48|Drosophila melanogaster Rox2 protein.
Length = 48
Score = 56.0 bits (129), Expect = 5e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 432 SVYVGNVDYGATAEELEQHFHGCGSI 509
SVYVGNVDYGA+AEELE HFHGCG+I
Sbjct: 1 SVYVGNVDYGASAEELEAHFHGCGTI 26
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 509 NRVTILCNKYDGHPKGFAYIEF 574
NRVTILCNK DGHPKGFAYIEF
Sbjct: 27 NRVTILCNKADGHPKGFAYIEF 48
>M25545-4|AAA28621.1| 361|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 361
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 147 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 27 RKLFIGGLDYRTTDENLKAHFEKWGNI 53
>M25545-3|AAA28624.1| 365|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 365
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 151 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNI 57
>M25545-2|AAA28623.1| 360|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 360
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 146 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 201
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 26 RKLFIGGLDYRTTDENLKAHFEKWGNI 52
>M25545-1|AAA28622.1| 364|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 364
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 150 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 205
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 30 RKLFIGGLDYRTTDENLKAHFEKWGNI 56
>M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 151 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNI 57
>AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p
protein.
Length = 361
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 147 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 27 RKLFIGGLDYRTTDENLKAHFEKWGNI 53
>AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF,
isoform F protein.
Length = 361
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 147 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 27 RKLFIGGLDYRTTDENLKAHFEKWGNI 53
>AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD,
isoform D protein.
Length = 361
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 147 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 27 RKLFIGGLDYRTTDENLKAHFEKWGNI 53
>AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC,
isoform C protein.
Length = 365
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 151 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNI 57
>AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB,
isoform B protein.
Length = 365
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 151 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNI 57
>AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE,
isoform E protein.
Length = 360
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 146 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 201
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 26 RKLFIGGLDYRTTDENLKAHFEKWGNI 52
>AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA,
isoform A protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.054
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPI---KVMPKRTNKPG 673
+ I+ +K G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 150 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 205
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R +++G +DY T E L+ HF G+I
Sbjct: 30 RKLFIGGLDYRTTDENLKAHFEKWGNI 56
>AY118842-1|AAM50702.1| 435|Drosophila melanogaster GM13065p
protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.38
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R+++VG++ Y AT E+L + F CG I
Sbjct: 260 RTIFVGSLKYSATEEQLREIFSSCGEI 286
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPG 673
KG AY+ F D+V A+ ++++L RPI V + K G
Sbjct: 300 KGVAYVCFQKPDAVGLALELNQTLLDDRPINVERYQVKKLG 340
>AY095099-1|AAM11427.1| 984|Drosophila melanogaster SD09402p
protein.
Length = 984
Score = 33.1 bits (72), Expect = 0.38
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 539 DGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMP 652
+G G AY+EF S Q A+ + ++FR R I+++P
Sbjct: 390 NGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVP 427
>AE014296-288|AAF47514.1| 985|Drosophila melanogaster CG7879-PB,
isoform B protein.
Length = 985
Score = 33.1 bits (72), Expect = 0.38
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 539 DGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMP 652
+G G AY+EF S Q A+ + ++FR R I+++P
Sbjct: 390 NGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVP 427
>AE014296-287|AAF47513.1| 985|Drosophila melanogaster CG7879-PA,
isoform A protein.
Length = 985
Score = 33.1 bits (72), Expect = 0.38
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 539 DGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMP 652
+G G AY+EF S Q A+ + ++FR R I+++P
Sbjct: 390 NGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVP 427
>AE014134-2808|AAF53587.1| 435|Drosophila melanogaster CG12288-PA
protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.38
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSI 509
R+++VG++ Y AT E+L + F CG I
Sbjct: 260 RTIFVGSLKYSATEEQLREIFSSCGEI 286
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPG 673
KG AY+ F D+V A+ ++++L RPI V + K G
Sbjct: 300 KGVAYVCFQKPDAVGLALELNQTLLDDRPINVERYQVKKLG 340
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
RSV+VGN+ Y AT E+L++ F G + L+
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLK 46
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
RSV+VGN+ Y AT E+L++ F G + L+
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLK 46
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
RSV+VGN+ Y AT E+L++ F G + L+
Sbjct: 16 RSVFVGNIPYEATEEKLKEIFSEVGPVLSLK 46
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 158 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 198
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 636 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 676
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 642 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 682
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 585 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 625
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 585 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 625
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 642 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 682
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 31.9 bits (69), Expect = 0.88
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 387 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
P ++E R++++GN++ TA EL HF G I
Sbjct: 642 PYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEI 682
>L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprotein
protein.
Length = 465
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprotein
protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p
protein.
Length = 434
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p
protein.
Length = 449
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKP 670
K FA++EF D A+ D +FRG+ +K+ +P
Sbjct: 162 KNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQP 201
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFH 494
R +YVGN+ +G T EE+ Q F+
Sbjct: 111 RRLYVGNIPFGVTDEEMMQFFN 132
>AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p
protein.
Length = 154
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 399 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
S +E+ D+ ++YVGN+ + T E++ + F CG +
Sbjct: 20 SEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDV 56
>AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding
protein 20 protein.
Length = 154
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 399 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
S +E+ D+ ++YVGN+ + T E++ + F CG +
Sbjct: 20 SEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDV 56
>AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE,
isoform E protein.
Length = 434
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD,
isoform D protein.
Length = 434
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI,
isoform I protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH,
isoform H protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF,
isoform F protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB,
isoform B protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG,
isoform G protein.
Length = 465
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC,
isoform C protein.
Length = 465
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA,
isoform A protein.
Length = 465
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAM 604
V +L +K G +GFA++EF D D+V A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-PA
protein.
Length = 154
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 399 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSI 509
S +E+ D+ ++YVGN+ + T E++ + F CG +
Sbjct: 20 SEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDV 56
>AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA
protein.
Length = 449
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKP 670
K FA++EF D A+ D +FRG+ +K+ +P
Sbjct: 162 KNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQP 201
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFH 494
R +YVGN+ +G T EE+ Q F+
Sbjct: 111 RRLYVGNIPFGVTDEEMMQFFN 132
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQYYAISMMATQKVLPTSNLA 578
R +YVGN+ +G T EE+ + F+ + GL A S + ++ N A
Sbjct: 93 RRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFA 142
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTNRP 694
K FA++EF D AMA D +G+ +K+ +P T+ P
Sbjct: 139 KNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTP 186
>BT023584-1|AAY84984.1| 291|Drosophila melanogaster IP09423p
protein.
Length = 291
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 548 PKGFAYIEFGDKDSVQTAMAMDESLFRGR 634
PKGFAY+E ++ + + MD+ RGR
Sbjct: 122 PKGFAYVEMDSREDLVRLLKMDKLKCRGR 150
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQYYAISMMATQKVLPTSNLA 578
R +YVGN+ +G T EE+ + F+ + GL A S + ++ N A
Sbjct: 93 RRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFA 142
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTNRP 694
K FA++EF D AMA D +G+ +K+ +P T+ P
Sbjct: 139 KNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTP 186
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQYYAISMMATQKVLPTSNLA 578
R +YVGN+ +G T EE+ + F+ + GL A S + ++ N A
Sbjct: 93 RRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFA 142
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 551 KGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTNRP 694
K FA++EF D AMA D +G+ +K+ +P T+ P
Sbjct: 139 KNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTP 186
>AE014296-1944|AAF50069.1| 291|Drosophila melanogaster CG11726-PA
protein.
Length = 291
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 548 PKGFAYIEFGDKDSVQTAMAMDESLFRGR 634
PKGFAY+E ++ + + MD+ RGR
Sbjct: 122 PKGFAYVEMDSREDLVRLLKMDKLKCRGR 150
>AE013599-3954|AAF47270.1| 250|Drosophila melanogaster CG3594-PA
protein.
Length = 250
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 554 GFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNK 667
GFA++E D S Q A + + +GR IKV K
Sbjct: 152 GFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGK 189
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 378 LTSPLNMSIEEKIEADNRSV-YVGNVDYGATAEELEQHFHGCGSITGLQ 521
+TS S+ NR V YV N+++ T ++LE HF G++ ++
Sbjct: 96 ITSDQLSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIR 144
>BT001728-1|AAN71483.1| 470|Drosophila melanogaster RE70333p
protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTNRP 694
VTI+ K +G+PKGF Y+ F A+A + + + + PK + + RP
Sbjct: 151 VTIVKEKNNGNPKGFGYVRF--TKFYYAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRP 208
>AE014296-817|AAF47879.2| 470|Drosophila melanogaster CG1316-PA
protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKVMPKRTNKPGLSSTNRP 694
VTI+ K +G+PKGF Y+ F A+A + + + + PK + + RP
Sbjct: 151 VTIVKEKNNGNPKGFGYVRF--TKFYYAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRP 208
>X55902-1|CAA39395.1| 700|Drosophila melanogaster Bj6 protein
protein.
Length = 700
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>M33496-2|AAA03215.1| 698|Drosophila melanogaster protein (
D.melanogaster no-on-transient A gene product, complete
cds. ).
Length = 698
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>M33496-1|AAA03214.1| 700|Drosophila melanogaster protein (
D.melanogaster no-on-transient A gene product, complete
cds. ).
Length = 700
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>AY119651-1|AAM50305.1| 700|Drosophila melanogaster RE58280p
protein.
Length = 700
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>AE014298-2380|AAX52501.1| 698|Drosophila melanogaster CG4211-PC,
isoform C protein.
Length = 698
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>AE014298-2379|AAF48597.2| 700|Drosophila melanogaster CG4211-PA,
isoform A protein.
Length = 700
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>AE014298-2378|AAN09398.1| 742|Drosophila melanogaster CG4211-PB,
isoform B protein.
Length = 742
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 357 SMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSIT 512
S+ P P+ + E K NR +YVGN+ T +EL + F G I+
Sbjct: 279 SISGPTFELEPVEVPTETKFSGRNR-LYVGNLTNDITDDELREMFKPYGEIS 329
>X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein.
Length = 326
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 515 VTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRPIKV 646
V I+ +K G +GFA+IEF D D V + + + + V
Sbjct: 144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDV 187
>BT001519-1|AAN71274.1| 304|Drosophila melanogaster LP11802p
protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 163 LDSIDNNHLEGTNGSMNMTDNSLGGGDEAAG 255
L S +NN+L T+GS + +SL G A+G
Sbjct: 13 LSSANNNNLSSTSGSGRIKSSSLATGSSASG 43
>AE014297-4090|AAN14403.1| 862|Drosophila melanogaster CG31064-PE,
isoform E protein.
Length = 862
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 163 LDSIDNNHLEGTNGSMNMTDNSLGGGDEAAG 255
L S +NN+L T+GS + +SL G A+G
Sbjct: 13 LSSANNNNLSSTSGSGRIKSSSLATGSSASG 43
>X62638-1|CAA44504.1| 345|Drosophila melanogaster hrp40.2 protein.
Length = 345
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>X62637-1|CAA44503.1| 321|Drosophila melanogaster hrp40.1 protein.
Length = 321
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>S62100-1|AAB26989.1| 308|Drosophila melanogaster SqdB protein.
Length = 308
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>S61875-1|AAB26988.1| 321|Drosophila melanogaster SqdA protein.
Length = 321
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>BT023832-1|AAZ86753.1| 308|Drosophila melanogaster LD29474p
protein.
Length = 308
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>AY118501-1|AAM49870.1| 321|Drosophila melanogaster LD09691p
protein.
Length = 321
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>AY113495-1|AAM29500.1| 330|Drosophila melanogaster RE53017p
protein.
Length = 330
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
R+V+VG + T E + + F CG IT L+
Sbjct: 234 RTVFVGGLPENITEEVIREIFESCGEITTLR 264
>AY071251-1|AAL48873.1| 330|Drosophila melanogaster RE29010p
protein.
Length = 330
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
R+V+VG + T E + + F CG IT L+
Sbjct: 234 RTVFVGGLPENITEEVIREIFESCGEITTLR 264
>AE014297-1708|AAF54964.2| 321|Drosophila melanogaster CG16901-PA,
isoform A protein.
Length = 321
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>AE014297-1706|AAF54963.2| 344|Drosophila melanogaster CG16901-PB,
isoform B protein.
Length = 344
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>AE014297-1705|AAN13570.1| 308|Drosophila melanogaster CG16901-PC,
isoform C protein.
Length = 308
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 393 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSITGL 518
N S D+R ++VG + + T +EL HF G I +
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>AE014296-2206|AAN11866.1| 430|Drosophila melanogaster CG10948-PA,
isoform A protein.
Length = 430
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
R+V+VG + T E + + F CG IT L+
Sbjct: 227 RTVFVGGLPENITEEVIREIFESCGEITTLR 257
>AE014296-2205|AAN11865.1| 437|Drosophila melanogaster CG10948-PB,
isoform B protein.
Length = 437
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
R+V+VG + T E + + F CG IT L+
Sbjct: 234 RTVFVGGLPENITEEVIREIFESCGEITTLR 264
>AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-PC,
isoform C protein.
Length = 804
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 429 RSVYVGNVDYGATAEELEQHFHGCGSITGLQ 521
R+V+VG + T E + + F CG IT L+
Sbjct: 234 RTVFVGGLPENITEEVIREIFESCGEITTLR 264
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,660,230
Number of Sequences: 53049
Number of extensions: 636985
Number of successful extensions: 2344
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 2128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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