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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30297.Seq
         (783 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...    89   5e-18
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...    89   5e-18
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...    89   5e-18
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    45   1e-04
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    44   2e-04
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    44   2e-04
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    44   2e-04
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    44   2e-04
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    44   2e-04
AE014297-2937|AAS65190.1|  181|Drosophila melanogaster CG17284-P...    32   1.0  
AE014297-2936|AAF55855.2|  196|Drosophila melanogaster CG17284-P...    32   1.0  
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916...    29   7.2  
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ...    29   7.2  

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score = 89.4 bits (212), Expect = 5e-18
 Identities = 42/56 (75%), Positives = 44/56 (78%)
 Frame = +2

Query: 422 EVRKVLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGF 589
           +VRKVLQLFRLRQINNGVF          LRIAEPYI WGYPNLKSVRE +YKRGF
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGF 149



 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 KEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
           K+A      ++E   RAE+Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 28  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87

Query: 405 INQVSPKSVKFCNCLDCAK*TMVCFVRLNKATVNI 509
           IN+V+PK  K        +     F++LNKAT+N+
Sbjct: 88  INKVAPKVRKVLQLFRLRQINNGVFIKLNKATINM 122


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score = 89.4 bits (212), Expect = 5e-18
 Identities = 42/56 (75%), Positives = 44/56 (78%)
 Frame = +2

Query: 422 EVRKVLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGF 589
           +VRKVLQLFRLRQINNGVF          LRIAEPYI WGYPNLKSVRE +YKRGF
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGF 162



 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 KEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
           K+A      ++E   RAE+Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 41  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100

Query: 405 INQVSPKSVKFCNCLDCAK*TMVCFVRLNKATVNI 509
           IN+V+PK  K        +     F++LNKAT+N+
Sbjct: 101 INKVAPKVRKVLQLFRLRQINNGVFIKLNKATINM 135



 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 115 PVKGKEDSKKLPAVPESVLK 174
           PV  K  +KKLPAVPES LK
Sbjct: 4   PVVKKPAAKKLPAVPESKLK 23


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score = 89.4 bits (212), Expect = 5e-18
 Identities = 42/56 (75%), Positives = 44/56 (78%)
 Frame = +2

Query: 422 EVRKVLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGF 589
           +VRKVLQLFRLRQINNGVF          LRIAEPYI WGYPNLKSVRE +YKRGF
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGF 162



 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 225 KEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
           K+A      ++E   RAE+Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 41  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100

Query: 405 INQVSPKSVKFCNCLDCAK*TMVCFVRLNKATVNI 509
           IN+V+PK  K        +     F++LNKAT+N+
Sbjct: 101 INKVAPKVRKVLQLFRLRQINNGVFIKLNKATINM 135



 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 115 PVKGKEDSKKLPAVPESVLK 174
           PV  K  +KKLPAVPES LK
Sbjct: 4   PVVKKPAAKKLPAVPESKLK 23


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 24/57 (42%), Positives = 33/57 (57%)
 Frame = -3

Query: 589 ESTFVYXLTDTL*VGVSPSNVRLGDT*IFTVALFRRTKHTIVYLAQSKQLQNFTDFG 419
           EST V  L   L +G++P +V LGD       L +  +HT+V L Q++QLQN  D G
Sbjct: 35  ESTLVDQLPHGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 32.7 bits (71), Expect = 0.58
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 416 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 279
           +LVDT D+DDK QFG  G+V +  +   +   D   F LD + L +L
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 434 VLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGFAXL 598
           + +  R+   +N VF  +       LR+ EP++ +G P+L S+RE V+K+GFA +
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARI 170


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 434 VLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGFAXL 598
           + +  R+   +N VF  +       LR+ EP++ +G P+L S+RE V+K+GFA +
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARI 170


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 434 VLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGFAXL 598
           + +  R+   +N VF  +       LR+ EP++ +G P+L S+RE V+K+GFA +
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARI 170


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 434 VLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGFAXL 598
           + +  R+   +N VF  +       LR+ EP++ +G P+L S+RE V+K+GFA +
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARI 170


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 434 VLQLFRLRQINNGVFCTSE*GYCEYLRIAEPYIAWGYPNLKSVREXVYKRGFAXL 598
           + +  R+   +N VF  +       LR+ EP++ +G P+L S+RE V+K+GFA +
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARI 170


>AE014297-2937|AAS65190.1|  181|Drosophila melanogaster CG17284-PB,
           isoform B protein.
          Length = 181

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 223 LKRRSSAIKKKGKSSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESV 402
           +++   AI    KS  G NST+ N   RN +KSD    HA +A  +F  + N  L S   
Sbjct: 25  VQKNDKAINSCRKSLLGNNSTNSNGEVRN-LKSDKVALHACIAECSF--RTNGFLLSNGT 81

Query: 403 VSTK 414
           V+T+
Sbjct: 82  VNTQ 85


>AE014297-2936|AAF55855.2|  196|Drosophila melanogaster CG17284-PA,
           isoform A protein.
          Length = 196

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 223 LKRRSSAIKKKGKSSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESV 402
           +++   AI    KS  G NST+ N   RN +KSD    HA +A  +F  + N  L S   
Sbjct: 40  VQKNDKAINSCRKSLLGNNSTNSNGEVRN-LKSDKVALHACIAECSF--RTNGFLLSNGT 96

Query: 403 VSTK 414
           V+T+
Sbjct: 97  VNTQ 100


>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
           protein.
          Length = 1260

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 232 RSSAIKKKGKSSRGLNSTSRNTA-SRNVMKSD*PDKHAIVATTTFP 366
           RSS   K+GKS+    STSR  + SRN   S+   +H++  + T P
Sbjct: 42  RSSGSGKRGKSNSRRRSTSRGRSDSRNTSPSNTRRRHSLSRSLTPP 87


>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
           isoform A protein.
          Length = 1260

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 232 RSSAIKKKGKSSRGLNSTSRNTA-SRNVMKSD*PDKHAIVATTTFP 366
           RSS   K+GKS+    STSR  + SRN   S+   +H++  + T P
Sbjct: 42  RSSGSGKRGKSNSRRRSTSRGRSDSRNTSPSNTRRRHSLSRSLTPP 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,116,391
Number of Sequences: 53049
Number of extensions: 515938
Number of successful extensions: 1100
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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