Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30288.Seq
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p pro...    64   2e-10
AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-P...    64   2e-10

>AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p
           protein.
          Length = 124

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/105 (33%), Positives = 48/105 (45%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P        ENE
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 EFLKKAHKXXXXXXXXXGHLTCPNLEDNFRFLKEFLIWLLNEAEV 574
             L+K H          G L CP     F         LLNE EV
Sbjct: 80  LLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIPNMLLNEDEV 124


>AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-PA
           protein.
          Length = 124

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/105 (33%), Positives = 48/105 (45%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P        ENE
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 EFLKKAHKXXXXXXXXXGHLTCPNLEDNFRFLKEFLIWLLNEAEV 574
             L+K H          G L CP     F         LLNE EV
Sbjct: 80  LLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIPNMLLNEDEV 124


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,848,079
Number of Sequences: 53049
Number of extensions: 594043
Number of successful extensions: 1450
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)