Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30263.Seq
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058648-1|AAL13877.1|  846|Drosophila melanogaster LD35132p pro...    30   3.0  
AE014297-2580|AAF55594.2|  846|Drosophila melanogaster CG7719-PA...    30   3.0  
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    29   9.3  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   9.3  

>AY058648-1|AAL13877.1|  846|Drosophila melanogaster LD35132p
           protein.
          Length = 846

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 IMYQSISVNNNMIYQVV-----VALNK*FFCIYLFTQFVIWTFSVHHLVLSRCIGSD 500
           +M +S  +N NM+ QV+     +AL++  FC+ LF  + + + S  +LV+   +G D
Sbjct: 88  VMRKSEMINKNMVSQVITERNALALSRSQFCVSLF--YSLQSLSYVYLVMEYMVGGD 142


>AE014297-2580|AAF55594.2|  846|Drosophila melanogaster CG7719-PA
           protein.
          Length = 846

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 IMYQSISVNNNMIYQVV-----VALNK*FFCIYLFTQFVIWTFSVHHLVLSRCIGSD 500
           +M +S  +N NM+ QV+     +AL++  FC+ LF  + + + S  +LV+   +G D
Sbjct: 88  VMRKSEMINKNMVSQVITERNALALSRSQFCVSLF--YSLQSLSYVYLVMEYMVGGD 142


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = -1

Query: 152  IKFLEAALLKTQTDLSK-LQSRTATIEKISRDL-NIEIHEIPES-RNENVL 9
            IK LEA L  TQTD +K LQ     +E++  DL NI+I  + ++ + E VL
Sbjct: 1877 IKQLEACLEVTQTDANKELQQVGKIMEQLKSDLENIQIALVTDTVQQETVL 1927


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = -1

Query: 152  IKFLEAALLKTQTDLSK-LQSRTATIEKISRDL-NIEIHEIPES-RNENVL 9
            IK LEA L  TQTD +K LQ     +E++  DL NI+I  + ++ + E VL
Sbjct: 1877 IKQLEACLEVTQTDANKELQQVGKIMEQLKSDLENIQIALVTDTVQQETVL 1927


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,276,596
Number of Sequences: 53049
Number of extensions: 544629
Number of successful extensions: 1712
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)