Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0110.Seq
(618 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 30 2.9
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 30 2.9
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 30 2.9
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 30 2.9
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 30 2.9
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 30 2.9
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 29 6.6
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 29 6.6
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 29 6.6
U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription ... 28 8.8
L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger pr... 28 8.8
AY128503-1|AAM75096.1| 585|Drosophila melanogaster SD06302p pro... 28 8.8
AY118660-1|AAM50029.1| 518|Drosophila melanogaster SD09850p pro... 28 8.8
AE013599-3921|AAF47244.2| 518|Drosophila melanogaster CG3608-PA... 28 8.8
AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC... 28 8.8
AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB... 28 8.8
AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA... 28 8.8
AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD... 28 8.8
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/77 (23%), Positives = 41/77 (53%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S DSVLD+ E + T + + +T +++ +S ++E V + + ++E+ I A
Sbjct: 411 SRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEEREM-VTNDLEAKAEEKAIKAEAL 469
Query: 327 LQTTEKDEVKTGDKESD 277
+ ++ +K D+E++
Sbjct: 470 AEDSKDSAIKNMDEETN 486
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/77 (23%), Positives = 41/77 (53%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S DSVLD+ E + T + + +T +++ +S ++E V + + ++E+ I A
Sbjct: 411 SRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEEREM-VTNDLEAKAEEKAIKAEAL 469
Query: 327 LQTTEKDEVKTGDKESD 277
+ ++ +K D+E++
Sbjct: 470 AEDSKDSAIKNMDEETN 486
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/77 (23%), Positives = 41/77 (53%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S DSVLD+ E + T + + +T +++ +S ++E V + + ++E+ I A
Sbjct: 411 SRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEEREM-VTNDLEAKAEEKAIKAEAL 469
Query: 327 LQTTEKDEVKTGDKESD 277
+ ++ +K D+E++
Sbjct: 470 AEDSKDSAIKNMDEETN 486
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/77 (23%), Positives = 41/77 (53%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S DSVLD+ E + T + + +T +++ +S ++E V + + ++E+ I A
Sbjct: 411 SRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEEREM-VTNDLEAKAEEKAIKAEAL 469
Query: 327 LQTTEKDEVKTGDKESD 277
+ ++ +K D+E++
Sbjct: 470 AEDSKDSAIKNMDEETN 486
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/77 (23%), Positives = 41/77 (53%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S DSVLD+ E + T + + +T +++ +S ++E V + + ++E+ I A
Sbjct: 411 SRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEEREM-VTNDLEAKAEEKAIKAEAL 469
Query: 327 LQTTEKDEVKTGDKESD 277
+ ++ +K D+E++
Sbjct: 470 AEDSKDSAIKNMDEETN 486
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/77 (23%), Positives = 41/77 (53%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S DSVLD+ E + T + + +T +++ +S ++E V + + ++E+ I A
Sbjct: 411 SRPDSVLDDGESNTTDTTTAEQQSTKDSKETVSCKEEREM-VTNDLEAKAEEKAIKAEAL 469
Query: 327 LQTTEKDEVKTGDKESD 277
+ ++ +K D+E++
Sbjct: 470 AEDSKDSAIKNMDEETN 486
>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple
ankyrin repeat singleKH domain protein protein.
Length = 4001
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/111 (20%), Positives = 47/111 (42%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S+++ + E +P S + T++ DE+ + E+ + DE+ I + +
Sbjct: 414 SVSEDDIPESDPDSCPHEGEVREDEDETEEESEDSDES-----EGEEEEEDEEEIDVLQD 468
Query: 327 LQTTEKDEVKTGDKESDKIETSGIERM*NVKTHTKLKQTIKSLIKSKLPVL 175
+ +E+ D+E D E S N K + + +++ K PVL
Sbjct: 469 -NDADDEEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAAANEKAPVL 518
>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
isoform B protein.
Length = 4001
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/111 (20%), Positives = 47/111 (42%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S+++ + E +P S + T++ DE+ + E+ + DE+ I + +
Sbjct: 414 SVSEDDIPESDPDSCPHEGEVREDEDETEEESEDSDES-----EGEEEEEDEEEIDVLQD 468
Query: 327 LQTTEKDEVKTGDKESDKIETSGIERM*NVKTHTKLKQTIKSLIKSKLPVL 175
+ +E+ D+E D E S N K + + +++ K PVL
Sbjct: 469 -NDADDEEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAAANEKAPVL 518
>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
isoform A protein.
Length = 4001
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/111 (20%), Positives = 47/111 (42%)
Frame = -1
Query: 507 SMADSVLDEXEPFSFXETQSLEYTTSTTQDIISPRDEANFSVGKNEKIDSDEQMIGIAAN 328
S+++ + E +P S + T++ DE+ + E+ + DE+ I + +
Sbjct: 414 SVSEDDIPESDPDSCPHEGEVREDEDETEEESEDSDES-----EGEEEEEDEEEIDVLQD 468
Query: 327 LQTTEKDEVKTGDKESDKIETSGIERM*NVKTHTKLKQTIKSLIKSKLPVL 175
+ +E+ D+E D E S N K + + +++ K PVL
Sbjct: 469 -NDADDEEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAAANEKAPVL 518
>U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription
factor protein.
Length = 2527
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 166 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 225
Query: 103 N 101
N
Sbjct: 226 N 226
>L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger
protein protein.
Length = 2529
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AY128503-1|AAM75096.1| 585|Drosophila melanogaster SD06302p
protein.
Length = 585
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 214 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 273
Query: 103 N 101
N
Sbjct: 274 N 274
>AY118660-1|AAM50029.1| 518|Drosophila melanogaster SD09850p
protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 530 FW*PSACCVQAGGFDLVAKSSGSGVAR 610
FW S CCVQ+ + AK S SG +R
Sbjct: 455 FWVMSKCCVQSSYAEQRAKQSDSGSSR 481
>AE013599-3921|AAF47244.2| 518|Drosophila melanogaster CG3608-PA
protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 530 FW*PSACCVQAGGFDLVAKSSGSGVAR 610
FW S CCVQ+ + AK S SG +R
Sbjct: 455 FWVMSKCCVQSSYAEQRAKQSDSGSSR 481
>AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC,
isoform C protein.
Length = 2532
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB,
isoform B protein.
Length = 2532
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA,
isoform A protein.
Length = 2532
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD,
isoform D protein.
Length = 2577
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 215 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 274
Query: 103 N 101
N
Sbjct: 275 N 275
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,106,412
Number of Sequences: 53049
Number of extensions: 410744
Number of successful extensions: 1807
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1807
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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