Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0094.Seq
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058406-1|AAL13635.1| 1007|Drosophila melanogaster GH18129p pro...    29   7.4  
AL031863-7|CAA21313.1| 1007|Drosophila melanogaster EG:EG0003.5 ...    29   7.4  
AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinles...    29   7.4  
AE014134-2468|AAF53378.1|  635|Drosophila melanogaster CG17341-P...    29   7.4  
AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-P...    29   7.4  
AE013599-2355|AAF57945.1| 1007|Drosophila melanogaster CG5859-PA...    29   7.4  
L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike n...    28   9.8  
AY128465-1|AAM75058.1|  254|Drosophila melanogaster RE21270p pro...    28   9.8  
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro...    28   9.8  
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA...    28   9.8  

>AY058406-1|AAL13635.1| 1007|Drosophila melanogaster GH18129p
           protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 363 LITASWQKWAADSQEVLPPVISQIIILR 446
           L  A+W KW  D+ E   PVI Q+ +LR
Sbjct: 128 LKVATWLKWDLDALEKNLPVIMQLALLR 155


>AL031863-7|CAA21313.1| 1007|Drosophila melanogaster EG:EG0003.5
           protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 363 LITASWQKWAADSQEVLPPVISQIIILR 446
           L  A+W KW  D+ E   PVI Q+ +LR
Sbjct: 128 LKVATWLKWDLDALEKNLPVIMQLALLR 155


>AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinless 2
           protein.
          Length = 751

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 481 SEGIAPRNKNQTRKIIICEITGGRTSCESAAHFCHEAVINAFRFDGWGS 335
           +E + P N     ++ +CE   G   C+S A + HE      +   W S
Sbjct: 594 NERLNPENYKAACRMDVCECPSGDCHCDSFAAYAHECRRLGVQLPDWRS 642


>AE014134-2468|AAF53378.1|  635|Drosophila melanogaster CG17341-PA
           protein.
          Length = 635

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 297 DISSKVSAFTVQRLPHPSNRNALITASWQKWAADSQE 407
           +I+S++SA  +  L + SN NAL+TA+ Q      Q+
Sbjct: 524 NINSQLSAANLASLSNASNNNALVTATQQLQQLQQQQ 560


>AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-PA
           protein.
          Length = 751

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 481 SEGIAPRNKNQTRKIIICEITGGRTSCESAAHFCHEAVINAFRFDGWGS 335
           +E + P N     ++ +CE   G   C+S A + HE      +   W S
Sbjct: 594 NERLNPENYKAACRMDVCECPSGDCHCDSFAAYAHECRRLGVQLPDWRS 642


>AE013599-2355|AAF57945.1| 1007|Drosophila melanogaster CG5859-PA
           protein.
          Length = 1007

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 363 LITASWQKWAADSQEVLPPVISQIIILR 446
           L  A+W KW  D+ E   PVI Q+ +LR
Sbjct: 128 LKVATWLKWDLDALEKNLPVIMQLALLR 155


>L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike
           nuclear protein protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 174 NVIVFVFFLSIRYVDELVAHLVLSGYRARRHLQHKCRHLPSDI 302
           N I FV  + I +VD  V H+ L  Y  R+H   K  HL +DI
Sbjct: 565 NGIEFVRRMQIEWVD--VLHIAL--YNLRKHQHQKYHHLLNDI 603


>AY128465-1|AAM75058.1|  254|Drosophila melanogaster RE21270p
           protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 234 LVLSGYRARRHLQHKCRHLPSDISSKVSAF 323
           L L+G R R  L+ +  H P+D S + SAF
Sbjct: 57  LPLAGARRRHRLRPRIHHQPTDASGQQSAF 86


>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
           protein.
          Length = 1043

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 174 NVIVFVFFLSIRYVDELVAHLVLSGYRARRHLQHKCRHLPSDI 302
           N I FV  + I +VD  V H+ L  Y  R+H   K  HL +DI
Sbjct: 565 NGIEFVRRMQIEWVD--VLHIAL--YNLRKHQHQKYHHLLNDI 603


>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
           protein.
          Length = 1043

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 174 NVIVFVFFLSIRYVDELVAHLVLSGYRARRHLQHKCRHLPSDI 302
           N I FV  + I +VD  V H+ L  Y  R+H   K  HL +DI
Sbjct: 565 NGIEFVRRMQIEWVD--VLHIAL--YNLRKHQHQKYHHLLNDI 603


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,299,862
Number of Sequences: 53049
Number of extensions: 478412
Number of successful extensions: 1097
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)