Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0060
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3568|AAN11144.1|  439|Drosophila melanogaster CG31703-P...    29   6.3  
AE014298-1773|AAF48168.2|  816|Drosophila melanogaster CG2559-PA...    29   8.3  

>AE014134-3568|AAN11144.1|  439|Drosophila melanogaster CG31703-PA,
           isoform A protein.
          Length = 439

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = -3

Query: 712 ISAKSQVESYTAKNIKHSRLGLFHCETETRLHITPSQIFASI*VNITWDAAVR 554
           +  +++ E  T K++   RL  F+ E +T   +   +IF ++  N  WD  ++
Sbjct: 386 VETETETEKGTEKDLHSQRLHTFNIELDTTGLVPFHEIFPNVKFNSPWDEIMK 438


>AE014298-1773|AAF48168.2|  816|Drosophila melanogaster CG2559-PA
           protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -3

Query: 487 TLMEDLKSYYYT*NRKKDLPLLSQIVDVL*YTNDEGANTSITVTNNDLNFRL 332
           T+M+D+K +Y   +  +DL L ++   +  +T D G N+     N D +F L
Sbjct: 287 TMMKDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNSYWYYLNMDYSFFL 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,624,959
Number of Sequences: 53049
Number of extensions: 585249
Number of successful extensions: 995
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)