Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F07
         (431 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p pro...   175   2e-44
AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,...   175   2e-44
AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,...   175   2e-44
AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,...   175   2e-44
AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p pro...    28   4.7  
AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB...    28   4.7  
AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA...    28   4.7  
BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p pro...    27   8.2  
AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-P...    27   8.2  
AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-P...    27   8.2  
AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-P...    27   8.2  
AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-P...    27   8.2  

>AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p
           protein.
          Length = 124

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 222 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 401
           +DTRLNK +WSKG+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 402 ASQE 413
           +S +
Sbjct: 121 SSDD 124


>AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,
           isoform C protein.
          Length = 124

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 222 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 401
           +DTRLNK +WSKG+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 402 ASQE 413
           +S +
Sbjct: 121 SSDD 124


>AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,
           isoform B protein.
          Length = 124

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 222 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 401
           +DTRLNK +WSKG+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 402 ASQE 413
           +S +
Sbjct: 121 SSDD 124


>AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,
           isoform A protein.
          Length = 124

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +3

Query: 42  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 222 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 401
           +DTRLNK +WSKG+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 402 ASQE 413
           +S +
Sbjct: 121 SSDD 124


>AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p
           protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 75  SAINEVVTREYTVNLHKRLHGVGFKKRA 158
           S+I+E VT EY  +LH   HG GF  ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581


>AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB,
           isoform B protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 75  SAINEVVTREYTVNLHKRLHGVGFKKRA 158
           S+I+E VT EY  +LH   HG GF  ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581


>AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA,
           isoform A protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 75  SAINEVVTREYTVNLHKRLHGVGFKKRA 158
           S+I+E VT EY  +LH   HG GF  ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581


>BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p
           protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 330 VRNLHHHYVFVKASHGHGREH 268
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-PE,
           isoform E protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 330 VRNLHHHYVFVKASHGHGREH 268
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-PC,
           isoform C protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 330 VRNLHHHYVFVKASHGHGREH 268
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-PB,
           isoform B protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 330 VRNLHHHYVFVKASHGHGREH 268
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-PA,
           isoform A protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 330 VRNLHHHYVFVKASHGHGREH 268
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,965,575
Number of Sequences: 53049
Number of extensions: 342510
Number of successful extensions: 701
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)