Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b01r
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016043-1|AAV36928.1|  415|Drosophila melanogaster LP20058p pro...    33   0.57 
AE014134-3544|AAF57235.1|  631|Drosophila melanogaster CG11630-P...    33   0.57 
BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p pro...    29   7.0  
AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-P...    29   7.0  

>BT016043-1|AAV36928.1|  415|Drosophila melanogaster LP20058p
           protein.
          Length = 415

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 280 FGVNSVDSFRAQWYLQPAKYDKDNLFYIYNREYSKALTLSRTLE 149
           FGV +++SF+  +Y      D DN  Y+Y+RE+      + T+E
Sbjct: 103 FGVETLESFKCMYYAMERHTDFDNR-YLYSREFELLTDGNNTIE 145


>AE014134-3544|AAF57235.1|  631|Drosophila melanogaster CG11630-PA
           protein.
          Length = 631

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 280 FGVNSVDSFRAQWYLQPAKYDKDNLFYIYNREYSKALTLSRTLE 149
           FGV +++SF+  +Y      D DN  Y+Y+RE+      + T+E
Sbjct: 103 FGVETLESFKCMYYAMERHTDFDNR-YLYSREFELLTDGNNTIE 145


>BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p
           protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -3

Query: 406 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 266
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +
Sbjct: 395 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 444


>AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-PA
           protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -3

Query: 406 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 266
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +
Sbjct: 489 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 538


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,857,477
Number of Sequences: 53049
Number of extensions: 650482
Number of successful extensions: 1980
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)