Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20087
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p pro...    28   9.8  
AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p pro...    28   9.8  
AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA...    28   9.8  

>AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p
           protein.
          Length = 892

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 453 DLKFGSAQSRSFXQEVCRLL*LYXL*VCVISPMSIQKRFHHPSA*FQPSQLQMYWHRR*S 274
           DL F S  SRS   ++  L         + +P+  +     P A   PSQL +  H++  
Sbjct: 615 DLLFSSGDSRSLTTQMLPL---------IFTPVQEKAEVAPPKAASTPSQLPVVTHKQQK 665

Query: 273 ARPHSLLTL 247
             P SLL L
Sbjct: 666 VSPQSLLLL 674


>AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p
           protein.
          Length = 892

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 453 DLKFGSAQSRSFXQEVCRLL*LYXL*VCVISPMSIQKRFHHPSA*FQPSQLQMYWHRR*S 274
           DL F S  SRS   ++  L         + +P+  +     P A   PSQL +  H++  
Sbjct: 615 DLLFSSGDSRSLTTQMLPL---------IFTPVQEKAEVAPPKAASTPSQLPVVTHKQQK 665

Query: 273 ARPHSLLTL 247
             P SLL L
Sbjct: 666 VSPQSLLLL 674


>AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA
           protein.
          Length = 892

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 453 DLKFGSAQSRSFXQEVCRLL*LYXL*VCVISPMSIQKRFHHPSA*FQPSQLQMYWHRR*S 274
           DL F S  SRS   ++  L         + +P+  +     P A   PSQL +  H++  
Sbjct: 615 DLLFSSGDSRSLTTQMLPL---------IFTPVQEKAEVAPPKAASTPSQLPVVTHKQQK 665

Query: 273 ARPHSLLTL 247
             P SLL L
Sbjct: 666 VSPQSLLLL 674


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,879,471
Number of Sequences: 53049
Number of extensions: 461615
Number of successful extensions: 1014
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)