Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20060X
         (916 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    48   2e-05
AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p pro...    29   6.7  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 5  SSTAVAAALELVDPPGCRNSAR 70
          SSTAVAAALELVDPPGCRNSAR
Sbjct: 2  SSTAVAAALELVDPPGCRNSAR 23


>AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p
           protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 270 LSLLDEDFTDPEAISNFKELKSKGFLPKGD 359
           L LL+++   PE+IS+F E   K + PKG+
Sbjct: 304 LPLLEKEVRGPESISSFSENLMKPYNPKGE 333


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,087,724
Number of Sequences: 53049
Number of extensions: 380683
Number of successful extensions: 639
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)