Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b20
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2703|AAF57685.1|  125|Drosophila melanogaster CG5189-PA...   156   1e-38
BT011055-1|AAR31126.1|  125|Drosophila melanogaster RE43922p pro...   155   1e-38
BT016034-1|AAV36919.1| 1147|Drosophila melanogaster RE02581p pro...    27   5.7  
AE014298-1703|AAF48105.2| 1147|Drosophila melanogaster CG2025-PA...    27   5.7  

>AE013599-2703|AAF57685.1|  125|Drosophila melanogaster CG5189-PA
           protein.
          Length = 125

 Score =  156 bits (378), Expect = 1e-38
 Identities = 71/92 (77%), Positives = 82/92 (89%)
 Frame = +2

Query: 89  MLKPKALTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHG 268
           MLKPKALT+VLSQANTGGVENTLLL+ +GALLAYSGY DKDAR+TAAIASN+W+AYEKHG
Sbjct: 1   MLKPKALTQVLSQANTGGVENTLLLSQEGALLAYSGYGDKDARITAAIASNIWAAYEKHG 60

Query: 269 RNVFKEDGLHLILVDCLNGKIAITQVAXLLLC 364
           RN F+E  L  +L+DC NG +AITQVA +LLC
Sbjct: 61  RNAFREGRLTFVLIDCENGHVAITQVASVLLC 92


>BT011055-1|AAR31126.1|  125|Drosophila melanogaster RE43922p
           protein.
          Length = 125

 Score =  155 bits (377), Expect = 1e-38
 Identities = 71/92 (77%), Positives = 82/92 (89%)
 Frame = +2

Query: 89  MLKPKALTEVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHG 268
           MLKPKALT+VLSQANTGGVENTLLL+ +GALLAYSGY DKDAR+TAAIASN+W+AYEKHG
Sbjct: 1   MLKPKALTQVLSQANTGGVENTLLLSQEGALLAYSGYGDKDARITAAIASNIWAAYEKHG 60

Query: 269 RNVFKEDGLHLILVDCLNGKIAITQVAXLLLC 364
           RN F+E  L  +L+DC NG +AITQVA +LLC
Sbjct: 61  RNAFREGRLTFVLIDCENGLVAITQVASVLLC 92


>BT016034-1|AAV36919.1| 1147|Drosophila melanogaster RE02581p
           protein.
          Length = 1147

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 113 EVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHGRNV 277
           E L  A + G+  +L    +G LL   GYN+K   +  AIA  + +  E    N+
Sbjct: 668 EELYPAISAGLSYSLSTIEKGLLLKVCGYNEKLHLIVEAIAEGMLNVAETLDENM 722


>AE014298-1703|AAF48105.2| 1147|Drosophila melanogaster CG2025-PA
           protein.
          Length = 1147

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 113 EVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHGRNV 277
           E L  A + G+  +L    +G LL   GYN+K   +  AIA  + +  E    N+
Sbjct: 668 EELYPAISAGLSYSLSTIEKGLLLKVCGYNEKLHLIVEAIAEGMLNVAETLDENM 722


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,250,160
Number of Sequences: 53049
Number of extensions: 197918
Number of successful extensions: 405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)