Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b10
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p pro...    41   0.002
AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P...    36   0.054
BT022586-1|AAY55002.1|  255|Drosophila melanogaster IP06774p pro...    35   0.13 
BT022553-1|AAY54969.1|  199|Drosophila melanogaster IP06574p pro...    35   0.13 
AF321289-1|AAG46059.1|  744|Drosophila melanogaster SKELETOR pro...    29   8.2  
AE014297-1166|AAO41539.1|  744|Drosophila melanogaster CG33676-P...    29   8.2  

>BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p
           protein.
          Length = 762

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +1

Query: 496 CAVLGCDD-CKNMDSIMFFRFP-EDSSLRQIWTDLTGRN-NWTPTDFSYICIPHFSVDCF 666
           CAV+ C     +  SI F RFP +   L Q W + T R+  W P+ +S +C  HF  + F
Sbjct: 5   CAVINCSHKYVHAGSISFHRFPFKRKDLLQKWKEFTQRSAQWMPSKWSALCSRHFGDEDF 64

Query: 667 KLDN 678
              N
Sbjct: 65  NCSN 68


>AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA
            protein.
          Length = 3781

 Score = 35.9 bits (79), Expect = 0.054
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +1

Query: 496  CAVLGCDDCKNMDSIMFFRFP-EDSSLRQIWTDLTGRNNWTPTDFS--YICIPHFSVDC 663
            C V GC+  K    +  FRFP ED  +   W +    N   P D +   IC  HF  DC
Sbjct: 1425 CVVEGCEASKEQPDVRLFRFPTEDDDMLWKWCNNLKMN---PVDCTGVRICNKHFEADC 1480



 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 493  TCAVLGCDDCKNMDSIMFFRFPEDSSLRQIWTDLTGRNNWTPTDFSY---ICIPHFSVDC 663
            +CAV GC+  +  D ++    P+   + ++W +  G+   T     Y   +C  HF   C
Sbjct: 2890 SCAVKGCEMIRPRDKVLLHGLPQRKDILRMWVE-NGQLEITEPQQQYMLRVCRNHFESRC 2948



 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 496  CAVLGCDDCKNMDSIMFFRFPEDSSLRQIWTDLTGRNNWTPTDFSY-ICIPHFSVDCFKL 672
            C+VL C   +    +  + +P+D    + W       +   +   + +C  HF+ +CF+ 
Sbjct: 2524 CSVLTCFQAE-ASGVRLYEYPKDMPTIRKWAAACRHRSMQASSHGFKVCQSHFAPECFEP 2582

Query: 673  D 675
            D
Sbjct: 2583 D 2583


>BT022586-1|AAY55002.1|  255|Drosophila melanogaster IP06774p
           protein.
          Length = 255

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +1

Query: 496 CAVLGCDD---CKNMDSIMFFRFPEDSSLRQIWTDLTGRNNWTPTDFSYICIPHFSVDCF 666
           CAV  C +     N     +F FP++    Q W D   R+N  PT  + IC  HF+ + F
Sbjct: 3   CAVKNCGNNNRIANRTKWRYFHFPKEKPNLQRWIDFCQRDNINPTT-ACICNEHFAPNDF 61

Query: 667 K 669
           +
Sbjct: 62  E 62


>BT022553-1|AAY54969.1|  199|Drosophila melanogaster IP06574p
           protein.
          Length = 199

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +1

Query: 496 CAVLGCDD---CKNMDSIMFFRFPEDSSLRQIWTDLTGRNNWTPTDFSYICIPHFSVDCF 666
           CAV  C +     N     +F FP++    Q W D   R+N  PT  + IC  HF+ + F
Sbjct: 3   CAVKNCGNNNRIANRTKWRYFHFPKEKPNLQRWIDFCQRDNINPTT-ACICNEHFAPNDF 61

Query: 667 K 669
           +
Sbjct: 62  E 62


>AF321289-1|AAG46059.1|  744|Drosophila melanogaster SKELETOR
           protein.
          Length = 744

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -1

Query: 520 NRHIQVQHKFSLYPCPYQHFVLIQELPSLLALVSFY 413
           +R I  Q    L+P P QH VL+Q+ PSL  +VS Y
Sbjct: 223 SRPILPQQHPHLHPHPQQHPVLLQQQPSL--IVSHY 256


>AE014297-1166|AAO41539.1|  744|Drosophila melanogaster CG33676-PA,
           isoform A protein.
          Length = 744

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -1

Query: 520 NRHIQVQHKFSLYPCPYQHFVLIQELPSLLALVSFY 413
           +R I  Q    L+P P QH VL+Q+ PSL  +VS Y
Sbjct: 223 SRPILPQQHPHLHPHPQQHPVLLQQQPSL--IVSHY 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,918,286
Number of Sequences: 53049
Number of extensions: 506686
Number of successful extensions: 1054
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)