Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b24
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001577-1|AAN71332.1|   87|Drosophila melanogaster RE23482p pro...   147   1e-35
AE014297-1674|AAN13563.1|   87|Drosophila melanogaster CG32854-P...   147   1e-35
BT024216-1|ABC86278.1|  705|Drosophila melanogaster RE12617p pro...    29   5.8  
BT012318-1|AAS77443.1|  705|Drosophila melanogaster GH21943p pro...    29   5.8  
AE014296-566|AAF47718.1|  680|Drosophila melanogaster CG11537-PB...    29   5.8  
AE014296-565|AAF47717.1|  680|Drosophila melanogaster CG11537-PA...    29   5.8  

>BT001577-1|AAN71332.1|   87|Drosophila melanogaster RE23482p
           protein.
          Length = 87

 Score =  147 bits (356), Expect = 1e-35
 Identities = 63/85 (74%), Positives = 74/85 (87%)
 Frame = +2

Query: 143 RHPSFIARTVFVQNNDIDNACRLINRIMGKEGLLAQYRLTRYYEKPFQTRRRVNHEKCKA 322
           RH  F+ARTV VQNN+++ ACRL+NR++GKE LL Q+R TR+YEKP+Q RRR+N EKCKA
Sbjct: 2   RHVQFLARTVLVQNNNVEEACRLLNRVLGKEELLDQFRRTRFYEKPYQVRRRINFEKCKA 61

Query: 323 IYNEDMERKIQFVLRKNRHEPFPGC 397
           IYNEDM RKIQFVLRKNR EPFPGC
Sbjct: 62  IYNEDMNRKIQFVLRKNRAEPFPGC 86


>AE014297-1674|AAN13563.1|   87|Drosophila melanogaster CG32854-PA
           protein.
          Length = 87

 Score =  147 bits (356), Expect = 1e-35
 Identities = 63/85 (74%), Positives = 74/85 (87%)
 Frame = +2

Query: 143 RHPSFIARTVFVQNNDIDNACRLINRIMGKEGLLAQYRLTRYYEKPFQTRRRVNHEKCKA 322
           RH  F+ARTV VQNN+++ ACRL+NR++GKE LL Q+R TR+YEKP+Q RRR+N EKCKA
Sbjct: 2   RHVQFLARTVLVQNNNVEEACRLLNRVLGKEELLDQFRRTRFYEKPYQVRRRINFEKCKA 61

Query: 323 IYNEDMERKIQFVLRKNRHEPFPGC 397
           IYNEDM RKIQFVLRKNR EPFPGC
Sbjct: 62  IYNEDMNRKIQFVLRKNRAEPFPGC 86


>BT024216-1|ABC86278.1|  705|Drosophila melanogaster RE12617p
           protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -1

Query: 630 FFMW*LFSMFVCV*FSRCLGILNIFNFYSGIVVFFYIEFFGEVFLTMSCFSTFKQVYPNY 451
           FF W      +C   S  +G  ++   +  +VV F +EFF    LTM   ST  Q +P++
Sbjct: 230 FFEWIRVVCNICCCKSSGIGEPSV---HHALVVIF-LEFFAWGLLTMPIISTLNQTFPDH 285

Query: 450 S 448
           +
Sbjct: 286 T 286


>BT012318-1|AAS77443.1|  705|Drosophila melanogaster GH21943p
           protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -1

Query: 630 FFMW*LFSMFVCV*FSRCLGILNIFNFYSGIVVFFYIEFFGEVFLTMSCFSTFKQVYPNY 451
           FF W      +C   S  +G  ++   +  +VV F +EFF    LTM   ST  Q +P++
Sbjct: 230 FFEWIRVVCNICCCKSSGIGEPSV---HHALVVIF-LEFFAWGLLTMPIISTLNQTFPDH 285

Query: 450 S 448
           +
Sbjct: 286 T 286


>AE014296-566|AAF47718.1|  680|Drosophila melanogaster CG11537-PB,
           isoform B protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -1

Query: 630 FFMW*LFSMFVCV*FSRCLGILNIFNFYSGIVVFFYIEFFGEVFLTMSCFSTFKQVYPNY 451
           FF W      +C   S  +G  ++   +  +VV F +EFF    LTM   ST  Q +P++
Sbjct: 205 FFEWIRVVCNICCCKSSGIGEPSV---HHALVVIF-LEFFAWGLLTMPIISTLNQTFPDH 260

Query: 450 S 448
           +
Sbjct: 261 T 261


>AE014296-565|AAF47717.1|  680|Drosophila melanogaster CG11537-PA,
           isoform A protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -1

Query: 630 FFMW*LFSMFVCV*FSRCLGILNIFNFYSGIVVFFYIEFFGEVFLTMSCFSTFKQVYPNY 451
           FF W      +C   S  +G  ++   +  +VV F +EFF    LTM   ST  Q +P++
Sbjct: 205 FFEWIRVVCNICCCKSSGIGEPSV---HHALVVIF-LEFFAWGLLTMPIISTLNQTFPDH 260

Query: 450 S 448
           +
Sbjct: 261 T 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,890,842
Number of Sequences: 53049
Number of extensions: 551276
Number of successful extensions: 1077
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)