Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0100
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p pro...   109   3e-24
AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin lig...   109   3e-24
AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA...   109   3e-24
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P...    32   0.74 

>AY121633-1|AAM51960.1|  219|Drosophila melanogaster GM02293p
           protein.
          Length = 219

 Score =  109 bits (263), Expect = 3e-24
 Identities = 76/208 (36%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
 Frame = +1

Query: 202 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 345
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST          T   
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61

Query: 346 DDFVEV-------PSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXX 504
            D +          S  +F+  G   + P+G +        REEPEKI+ WREEQ     
Sbjct: 62  GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPP---PSREEPEKIRKWREEQKQRLE 118

Query: 505 XXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEW 684
                       + Q +KKEL+DW +   E ISKTK                ++E G EW
Sbjct: 119 EKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRNAEKQAATLENGTIEPGTEW 178

Query: 685 ARVSELCDFGP---RRGRDVARLRSIVL 759
            R+++LCDF P   + G+DV+R+RSI L
Sbjct: 179 ERIAKLCDFNPKVNKAGKDVSRMRSIYL 206


>AF055900-1|AAC14276.1|  228|Drosophila melanogaster clathrin light
           chain protein.
          Length = 228

 Score =  109 bits (263), Expect = 3e-24
 Identities = 76/208 (36%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
 Frame = +1

Query: 202 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 345
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST          T   
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61

Query: 346 DDFVEV-------PSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXX 504
            D +          S  +F+  G   + P+G +        REEPEKI+ WREEQ     
Sbjct: 62  GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPP---PSREEPEKIRKWREEQKQRLE 118

Query: 505 XXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEW 684
                       + Q +KKEL+DW +   E ISKTK                ++E G EW
Sbjct: 119 EKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRNAEKQAATLENGTIEPGTEW 178

Query: 685 ARVSELCDFGP---RRGRDVARLRSIVL 759
            R+++LCDF P   + G+DV+R+RSI L
Sbjct: 179 ERIAKLCDFNPKVNKAGKDVSRMRSIYL 206


>AE014296-3305|AAF49047.1|  219|Drosophila melanogaster CG6948-PA
           protein.
          Length = 219

 Score =  109 bits (263), Expect = 3e-24
 Identities = 76/208 (36%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
 Frame = +1

Query: 202 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAISTS---------TNGF 345
           DFGD F   E VDPAA+FLAREQ+ L  LE E+   +++ PPA ST          T   
Sbjct: 2   DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASE 61

Query: 346 DDFVEV-------PSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKIWREEQXXXXX 504
            D +          S  +F+  G   + P+G +        REEPEKI+ WREEQ     
Sbjct: 62  GDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPP---PSREEPEKIRKWREEQKQRLE 118

Query: 505 XXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKXXXXXXXXXXXXGSESSVEEGNEW 684
                       + Q +KKEL+DW +   E ISKTK                ++E G EW
Sbjct: 119 EKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRNAEKQAATLENGTIEPGTEW 178

Query: 685 ARVSELCDFGP---RRGRDVARLRSIVL 759
            R+++LCDF P   + G+DV+R+RSI L
Sbjct: 179 ERIAKLCDFNPKVNKAGKDVSRMRSIYL 206


>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
            protein.
          Length = 2768

 Score = 32.3 bits (70), Expect = 0.74
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = +1

Query: 253  LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTT 432
            ++ E  ++   ED+L +S    AI++ST G  D     ++SA    G  D+A   + PT 
Sbjct: 835  ISEESTEVPVAEDDLSSSTSASAIASSTEGVQDAASETTSSAPARAGDKDEAAT-TVPTA 893

Query: 433  VFKQERE 453
              K + E
Sbjct: 894  QDKDDEE 900


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,657,959
Number of Sequences: 53049
Number of extensions: 688891
Number of successful extensions: 2446
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)