Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0031
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3776|EAA45980.1|  359|Drosophila melanogaster CG40298-P...    29   6.5  

>AE014296-3776|EAA45980.1|  359|Drosophila melanogaster CG40298-PA
           protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 329 LYY*NLTNHILNVYKIK*NYSCCRF*ILFAFCAKFSRNEQYCI---GLGVFFDIYFSTTR 499
           +YY +  N+IL  +K+K N  CC+  +   F    S     C     L + +D+Y  T  
Sbjct: 190 VYYADTQNNILENWKLKTNLECCK--LYVNFLQDQSSQIFKCATVDNLNIIYDVYSVTKL 247

Query: 500 HC-VILP*NKKRTNILHDCLQY 562
           +   IL   + R   L +CL Y
Sbjct: 248 NIKYILRQLEFRIQRLFNCLLY 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,464,076
Number of Sequences: 53049
Number of extensions: 555274
Number of successful extensions: 926
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)