Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D06
(905 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 189 5e-48
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 189 5e-48
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 189 5e-48
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 189 5e-48
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 158 8e-39
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 2.2
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 2.2
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.9
DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856 pro... 30 3.8
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 189 bits (460), Expect = 5e-48
Identities = 92/166 (55%), Positives = 111/166 (66%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVY+EK+E + D+VN+VH + +N+RQ Y VS+ AGHQTSAES
Sbjct: 11 SVYTEKNEPAKD-KNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAES 69
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 70 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVS 129
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 130 AIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLR 175
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 189 bits (460), Expect = 5e-48
Identities = 92/166 (55%), Positives = 111/166 (66%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVY+EK+E + D+VN+VH + +N+RQ Y VS+ AGHQTSAES
Sbjct: 11 SVYTEKNEPAKD-KNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAES 69
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 70 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVS 129
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 130 AIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLR 175
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 189 bits (460), Expect = 5e-48
Identities = 92/166 (55%), Positives = 111/166 (66%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVY+EK+E + D+VN+VH + +N+RQ Y VS+ AGHQTSAES
Sbjct: 11 SVYTEKNEPAKD-KNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAES 69
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 70 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVS 129
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 130 AIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLR 175
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 189 bits (460), Expect = 5e-48
Identities = 92/166 (55%), Positives = 111/166 (66%)
Frame = +2
Query: 92 SVYSEKSETVQGCSQAXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 271
SVY+EK+E + D+VN+VH + +N+RQ Y VS+ AGHQTSAES
Sbjct: 11 SVYTEKNEPAKD-KNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAES 69
Query: 272 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 451
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 70 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVS 129
Query: 452 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 130 AIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLR 175
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 158 bits (384), Expect = 8e-39
Identities = 73/113 (64%), Positives = 83/113 (73%)
Frame = +2
Query: 251 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 430
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 431 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 589
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLR
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLR 113
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 371 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWFGDQPP 240
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 371 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWFGDQPP 240
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 283 TCCRP-NSACPWWWYS*VRSGC 345
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 283 TCCRP-NSACPWWWYS*VRSGC 345
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 283 TCCRP-NSACPWWWYS*VRSGC 345
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856
protein.
Length = 265
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 538 GYNQGKFGNLFNNVSSSLNECWDAGSSNGCRQGR 437
GYN+G+ GN +N +++ N + G G QGR
Sbjct: 200 GYNRGRNGNNYNRGNNNSNNYNNRGGRRGRNQGR 233
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,820,124
Number of Sequences: 53049
Number of extensions: 805456
Number of successful extensions: 3788
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3647
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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