Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40078
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 63 2e-10
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 41 0.001
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 41 0.001
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 39 0.004
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 39 0.004
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 39 0.004
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 34 0.091
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 34 0.091
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 34 0.12
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 32 0.37
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 31 1.1
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 31 1.1
U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical pr... 28 6.0
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -3
Query: 549 NHFTANKFSQC*FGEEINEPG-GKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDA 373
+HF A+ EEI G GK IK+TG G VS+L+RGS+ V+ EA RS+HDA
Sbjct: 349 DHFNADALGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDA 408
Query: 372 LCAVRCV 352
LC +RC+
Sbjct: 409 LCVIRCL 415
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
YC RA +DALE+IP TLAENAGL+PI TVTELR
Sbjct: 449 YCWRAFADALELIPYTLAENAGLSPIHTVTELR 481
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -1
Query: 95 TDMRTEHVLQPLHVTASALALATETVRAILK 3
TDM E V+QPL VTASA+ A+E VR+ILK
Sbjct: 501 TDMVEEDVVQPLLVTASAIKQASECVRSILK 531
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -3
Query: 549 NHFTANKFSQC*FGEEINEPG-GKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDA 373
+HF A+ EEI G GK IK+TG G VS+L+RGS+ V+ EA RS+HDA
Sbjct: 349 DHFNADALGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDA 408
Query: 372 LCAVRCV 352
LC +RC+
Sbjct: 409 LCVIRCL 415
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
YC RA +DALE+IP TLAENAGL+PI TVTELR
Sbjct: 449 YCWRAFADALELIPYTLAENAGLSPIHTVTELR 481
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -1
Query: 95 TDMRTEHVLQPLHVTASALALATETVRAILK 3
TDM E V+QPL VTASA+ A+E VR+ILK
Sbjct: 501 TDMVEEDVVQPLLVTASAIKQASECVRSILK 531
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y RA +DALE IP LAEN+GL PI+ +++L+
Sbjct: 445 YAFRAFADALESIPMALAENSGLAPIDALSDLK 477
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -3
Query: 447 RTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
+ V++ VRG + ++ EA R+LHDALC +R
Sbjct: 380 KAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y RA +DALE IP LAEN+GL PI+ +++L+
Sbjct: 445 YAFRAFADALESIPMALAENSGLAPIDALSDLK 477
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -3
Query: 447 RTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
+ V++ VRG + ++ EA R+LHDALC +R
Sbjct: 380 KAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y RA +DALE IP LAEN+GL PI+ +++L+
Sbjct: 239 YAFRAFADALESIPMALAENSGLAPIDALSDLK 271
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -3
Query: 447 RTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
+ V++ VRG + ++ EA R+LHDALC +R
Sbjct: 174 KAVTIFVRGGNKMIIDEAKRALHDALCVIR 203
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTELR 155
Y RA +DALE IP LAEN+GL PI+ +++L+
Sbjct: 445 YAFRAFADALESIPMALAENSGLAPIDALSDLK 477
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -3
Query: 447 RTVSVLVRGSSGAVVAEAARSLHDALCAVR 358
+ V++ VRG + ++ EA R+LHDALC +R
Sbjct: 380 KAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -3
Query: 531 KFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
+F C EEI + ++ +G + G SV++RG++ ++ E+ RSLHDALC +
Sbjct: 336 QFGSCDLIEEIMIGEDRLLRFSGV-KLGEACSVVLRGATQQILDESERSLHDALCVL 391
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -3
Query: 531 KFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
+F C EEI + ++ +G + G SV++RG++ ++ E+ RSLHDALC +
Sbjct: 336 QFGSCDLIEEIMIGEDRLLRFSGV-KLGEACSVVLRGATQQILDESERSLHDALCVL 391
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = -3
Query: 531 KFSQC*FGEEINEPGGKYIKMTGCGQGGRTVSVLVRGSSGAVVAEAARSLHDALCAV 361
+F C EEI + ++ +G + G SV++RG++ ++ E+ RSLHDALC +
Sbjct: 336 QFGSCDLIEEIMIGEDRLLRFSGV-KLGEACSVVLRGATQQILDESERSLHDALCVL 391
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 459 GQGGRTVS-VLVRGSSGAVVAEAARSLHDALCAVRCV 352
G RT S +++RG++ ++ E RS+HD+LC VR V
Sbjct: 369 GPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRV 405
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 459 GQGGRTVS-VLVRGSSGAVVAEAARSLHDALCAVRCV 352
G RT S +++RG++ ++ E RS+HD+LC VR V
Sbjct: 369 GPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRV 405
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 253 YCLRA*SDALEVIPSTLAENAGLNPIETVTEL 158
Y ++ + ALE +P +AENAG+ ET+T+L
Sbjct: 469 YAIKKFAHALETLPKAIAENAGMPTTETLTKL 500
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 229 ALEVIPSTLAENAGLNPIETVTELRGL 149
ALEVIP TL +N G + I +TELR +
Sbjct: 445 ALEVIPRTLIQNCGGSTIRKMTELRAI 471
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 438 SVLVRGSSGAVVAEAARSLHDALCAVR 358
++L+RG + +AE RSLHDA+ VR
Sbjct: 369 TLLLRGGAEQFIAETERSLHDAIMIVR 395
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 438 SVLVRGSSGAVVAEAARSLHDALCAVR 358
++L+RG + +AE RSLHDA+ VR
Sbjct: 369 TLLLRGGAEQFIAETERSLHDAIMIVR 395
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 229 ALEVIPSTLAENAGLNPIETVTELR 155
A E+IP L +NAGL+ ++ + +LR
Sbjct: 439 AFEIIPRQLCQNAGLDALDVLNKLR 463
>U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical
protein F12D9.1b protein.
Length = 279
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = -2
Query: 232 DALEVIPSTLAENAGLNPIETVTELRGLTLLALAVAPVSTYAADELQICARSMCCNRFML 53
D +E+ PS LNP+ + +L ++L +LAV + L + +CC F L
Sbjct: 135 DEIEIPPSESEYKCYLNPLLSQVDLTDISLASLAVI-IRLGLPALLHVSGALVCCFAFFL 193
Query: 52 QLPRSHSQPKLCVLYS 5
+ H + L+S
Sbjct: 194 GVV-GHIRSSFYTLFS 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,399,876
Number of Sequences: 27780
Number of extensions: 306192
Number of successful extensions: 984
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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