Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40076
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68880-8|CAJ43445.1|  883|Caenorhabditis elegans Hypothetical pr...    98   6e-21
Z68880-7|CAA93095.1|  870|Caenorhabditis elegans Hypothetical pr...    98   6e-21
AF024493-3|AAB70322.2|  319|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z68880-8|CAJ43445.1|  883|Caenorhabditis elegans Hypothetical
           protein T14G10.5b protein.
          Length = 883

 Score = 98.3 bits (234), Expect = 6e-21
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = +1

Query: 46  NPDAKETGLAHLCEFIEDCEHVTLAVRILHVLGREGPKARQPSRYIRYIYNRVILES 216
           NPDAK  GLAHLCEFIEDCEH  L+ R+LH+LGRE PK   PS YIR+IYNRVILES
Sbjct: 436 NPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLGREAPKTPNPSSYIRFIYNRVILES 492



 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
 Frame = +3

Query: 255 FGASRPELLPNIRVLLSRCQLDEDDEVRDRAVFYSAILDSGNPQLINDYIINIQVPNPVL 434
           FGA   +L P+I+VLL RC LD DDEVRDRA FY  +L      LI+++I++    +P  
Sbjct: 506 FGAQCVDLRPSIQVLLKRCLLDSDDEVRDRATFYLKMLTEAAEGLIHNFILDGLQVSPSG 565

Query: 435 LEKSLSDYLASGDQSEPFNIAAVPTLKNHKSL--KNLPLRFKHVKHP*CLEKDNILSSYR 608
           LE+S+ DYL SG  S PF++  VP  +   S   K +P   +  + P   + +   +   
Sbjct: 566 LERSILDYLRSGSYSSPFDLRVVPVTQQALSQPEKRVPQLVEEEEKPKAPKVEPYAAQLA 625

Query: 609 LFPGIEKLGALYSKLWRSHLT 671
             P    LG ++    R  LT
Sbjct: 626 AIPQFAALGPVFKSSTRIALT 646


>Z68880-7|CAA93095.1|  870|Caenorhabditis elegans Hypothetical
           protein T14G10.5a protein.
          Length = 870

 Score = 98.3 bits (234), Expect = 6e-21
 Identities = 43/57 (75%), Positives = 47/57 (82%)
 Frame = +1

Query: 46  NPDAKETGLAHLCEFIEDCEHVTLAVRILHVLGREGPKARQPSRYIRYIYNRVILES 216
           NPDAK  GLAHLCEFIEDCEH  L+ R+LH+LGRE PK   PS YIR+IYNRVILES
Sbjct: 423 NPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLGREAPKTPNPSSYIRFIYNRVILES 479



 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
 Frame = +3

Query: 255 FGASRPELLPNIRVLLSRCQLDEDDEVRDRAVFYSAILDSGNPQLINDYIINIQVPNPVL 434
           FGA   +L P+I+VLL RC LD DDEVRDRA FY  +L      LI+++I++    +P  
Sbjct: 493 FGAQCVDLRPSIQVLLKRCLLDSDDEVRDRATFYLKMLTEAAEGLIHNFILDGLQVSPSG 552

Query: 435 LEKSLSDYLASGDQSEPFNIAAVPTLKNHKSL--KNLPLRFKHVKHP*CLEKDNILSSYR 608
           LE+S+ DYL SG  S PF++  VP  +   S   K +P   +  + P   + +   +   
Sbjct: 553 LERSILDYLRSGSYSSPFDLRVVPVTQQALSQPEKRVPQLVEEEEKPKAPKVEPYAAQLA 612

Query: 609 LFPGIEKLGALYSKLWRSHLT 671
             P    LG ++    R  LT
Sbjct: 613 AIPQFAALGPVFKSSTRIALT 633


>AF024493-3|AAB70322.2|  319|Caenorhabditis elegans Hypothetical
           protein F23F1.3 protein.
          Length = 319

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 411 IQVPNPVLLEKSLSDYLASGDQSEPFNIAAVPTLKNHKSLKNLPLRFKHVKHP*C 575
           I +   V  +K +S+YL +G + + F++ A+P+L     LKN+ L    +K   C
Sbjct: 90  ISITPEVAFQKLISEYLRNGTRIKKFHLYALPSL-----LKNVELHVSELKIDGC 139


>Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical
           protein F23H12.4 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 761 NRGNPNWPGPKNGF*PHSPPGLSRFSG 681
           N G P  PGPK    P  PPG+   SG
Sbjct: 240 NDGPPGPPGPKGAPGPDGPPGVDGQSG 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,043,355
Number of Sequences: 27780
Number of extensions: 455794
Number of successful extensions: 1129
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)