Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20151
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical pr...    95   4e-20
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    31   0.72 
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        31   0.72 
U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF068713-7|AAC17798.2|  359|Caenorhabditis elegans Hypothetical ...    28   6.7  
AF003140-2|ABR92610.1|  233|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical
           protein B0286.3 protein.
          Length = 423

 Score = 95.5 bits (227), Expect = 4e-20
 Identities = 43/75 (57%), Positives = 58/75 (77%)
 Frame = +1

Query: 286 DGVKAHDLEGKAAISNQTNAKVFEILKSAGIKTAFVKIASETAFLSKKCEMIPIEWVTRR 465
           + V+ ++LEGK+ I+++T + VFE L+  G+ T F K  SET F+++KC MIPIEWV RR
Sbjct: 47  NAVRKNELEGKSRIASKTTSNVFEYLQLLGLPTHFEKSISETEFVARKCTMIPIEWVARR 106

Query: 466 LATGSFLKRNPGVPE 510
           +ATGSFLKRNPGV E
Sbjct: 107 VATGSFLKRNPGVKE 121



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = +3

Query: 486 KKESWCTRGFRFTPPKQETFFKDDANHDPQWSEEQIISAKFNYNGLLIGRDE-HYMRKAT 662
           K+      GFRF   K ETFFKDDAN DPQW++EQI+S     + L IGR+E   M+K T
Sbjct: 114 KRNPGVKEGFRFNDLKLETFFKDDANDDPQWTDEQIVSNGLMIDHLKIGREEISLMKKMT 173

Query: 663 ILIFEILEKAWVCVTAHLL 719
            L+F  LEK W    + L+
Sbjct: 174 KLVFRALEKGWALSNSALI 192



 Score = 33.1 bits (72), Expect = 0.24
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 680 LGESLGLRDCALIDMKIEFGVDTEGSIV 763
           L +   L + ALIDMKIEFGV  EG I+
Sbjct: 180 LEKGWALSNSALIDMKIEFGVTVEGEIL 207



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 192 KLLIEGKTKQVFDVPDQPGY 251
           +LL EGKTKQ+FD+  +  Y
Sbjct: 15  ELLAEGKTKQIFDIKGEKDY 34


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
            protein F43G9.6 protein.
          Length = 2034

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 436  MIPIEWVTRRLATGSFLKRNPGVPEASGSLLQNKRRSL 549
            M+P++W +R  A+ S   R+PG PE+    ++  RR L
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPESGMEYVRIFRRPL 1315


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 436  MIPIEWVTRRLATGSFLKRNPGVPEASGSLLQNKRRSL 549
            M+P++W +R  A+ S   R+PG PE+    ++  RR L
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPESGMEYVRIFRRPL 1315


>U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical
           protein ZK563.5 protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 283 SDGVKAHDLEGKAAISNQTNAKVFEILKSAGIKTAFVKIASETAFLSKKC 432
           +D +  HD++   A+    NA+VF  L + GIK A    AS       +C
Sbjct: 50  TDAIDKHDVDTLCAMWESWNARVFHSLDTEGIKQAQCYEASAYRLFLVRC 99


>AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical
           protein C17B7.8 protein.
          Length = 558

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = +1

Query: 16  GTTLTVAPLLVIYNL*KALIATYIRRAIPTVLEARFIPTCARKLQK-------CLILNKL 174
           GT +T+  +L  YNL    +A  +    PTV    F+ T     +K          + KL
Sbjct: 61  GTYITLDQILSPYNLTMWYMAVKLMDT-PTVGSEHFVETSREYAKKKNNSERFSFAVEKL 119

Query: 175 DNINWANFSLRVRPNRYSMFRTNL 246
           +NIN  N   +    R+S F  NL
Sbjct: 120 ENINLTNKFKKFFEKRFSKFNCNL 143


>AF068713-7|AAC17798.2|  359|Caenorhabditis elegans Hypothetical
           protein T24A6.11 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 255 CFLTRTESPQRWCQSPRFGGKGGYFQSDKCK 347
           C LT        CQ P FG   G F  D CK
Sbjct: 3   CSLTSPSKQCSICQRPAFGQNYGSFSCDACK 33


>AF003140-2|ABR92610.1|  233|Caenorhabditis elegans Hypothetical
           protein C44E4.8 protein.
          Length = 233

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 241 NLGTAAS*QGQNHRSDGVKAHDLEGKAAISNQTNAK 348
           N  T  +  G  H  DG   H++E  +A S Q+  K
Sbjct: 34  NFSTMLNISGMKHSEDGAMKHEMEVHSATSGQSKPK 69


>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
            C09H6.1b protein.
          Length = 1309

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 59   YKRPSLLHTFVARSPPYWKLASF 127
            Y+RP L H FVA++  Y K  +F
Sbjct: 1147 YQRPKLKHQFVAKNAKYCKKCTF 1169


>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
            C09H6.1a protein.
          Length = 1311

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 59   YKRPSLLHTFVARSPPYWKLASF 127
            Y+RP L H FVA++  Y K  +F
Sbjct: 1147 YQRPKLKHQFVAKNAKYCKKCTF 1169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,353,903
Number of Sequences: 27780
Number of extensions: 425573
Number of successful extensions: 1011
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)