Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20130
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 129 7e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 128 1e-30
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 128 1e-30
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 127 3e-30
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 125 1e-29
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 65 2e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 65 2e-11
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 65 2e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 64 5e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 64 5e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 63 7e-11
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 62 2e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 62 2e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 62 2e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 62 2e-10
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 59 1e-09
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 56 1e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 51 3e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 51 3e-07
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 34 0.047
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 34 0.047
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 34 0.047
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 34 0.047
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 28 2.3
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 28 2.3
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z81457-2|CAB03814.1| 191|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 27 4.1
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 27 7.1
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 27 7.1
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 27 7.1
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 27 7.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 129 bits (312), Expect = 7e-31
Identities = 62/84 (73%), Positives = 64/84 (76%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIM T+SVVPSPKVSDTVVEP
Sbjct: 159 YPDRIMMTFSVVPSPKVSDTVVEP 182
Score = 97.1 bits (231), Expect = 4e-21
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 184 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNH 227
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 128 bits (310), Expect = 1e-30
Identities = 62/84 (73%), Positives = 64/84 (76%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVD+VLDVVRKEAES DCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 159 YPDRIMNTFSVVPSPKVSDTVVEP 182
Score = 95.1 bits (226), Expect = 2e-20
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 184 NATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNH 227
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 128 bits (310), Expect = 1e-30
Identities = 62/84 (73%), Positives = 64/84 (76%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVD+VLDVVRKEAES DCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 159 YPDRIMNTFSVVPSPKVSDTVVEP 182
Score = 95.1 bits (226), Expect = 2e-20
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 184 NATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNH 227
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 127 bits (307), Expect = 3e-30
Identities = 60/84 (71%), Positives = 64/84 (76%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVD+VLDVVRKEAE CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIM+++SVVPSPKVSDTVVEP
Sbjct: 159 YPDRIMSSFSVVPSPKVSDTVVEP 182
Score = 96.3 bits (229), Expect = 8e-21
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDET+CIDNEALYDICFRTLKLS PTYGDLNH
Sbjct: 184 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNH 227
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 127 bits (306), Expect = 4e-30
Identities = 59/84 (70%), Positives = 64/84 (76%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVD+VLDV+RKEAE CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIM+++SVVPSPKVSDTVVEP
Sbjct: 159 YPDRIMSSFSVVPSPKVSDTVVEP 182
Score = 95.5 bits (227), Expect = 1e-20
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNH
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNH 227
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 125 bits (302), Expect = 1e-29
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVD+VLDV+RKEAE CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
+PDRIM+++SVVPSPKVSDTVVEP
Sbjct: 159 FPDRIMSSFSVVPSPKVSDTVVEP 182
Score = 95.5 bits (227), Expect = 1e-20
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNH
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNH 227
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNW++G+Y +GAE+VD VL V+R+EAE+ D L+GFQ K+REE
Sbjct: 99 NNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y D+ ++T S++PS KVSDTVVEP
Sbjct: 159 YSDKTLSTCSIIPSAKVSDTVVEP 182
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYGDLNH 388
NA LS+ L++N DE +CIDNEA++DIC LKL + TYGDLNH
Sbjct: 184 NAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNH 228
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNW++G+Y +GAE+VD VL V+R+EAE+ D L+GFQ K+REE
Sbjct: 99 NNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y D+ ++T S++PS KVSDTVVEP
Sbjct: 159 YSDKTLSTCSIIPSAKVSDTVVEP 182
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYGDLNH 388
NA LS+ L++N DE +CIDNEA++DIC LKL + TYGDLNH
Sbjct: 184 NAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNH 228
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 68.1 bits (159), Expect = 2e-12
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D VLD +RK+ E+C+ LQGF ++ E
Sbjct: 104 NNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVE 163
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
+ + +SV P+P+VS +VVEP
Sbjct: 164 FGKKSKLEFSVYPAPQVSTSVVEP 187
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E +D ++ +DNEA+YD+C + L + P+Y +LN
Sbjct: 189 NSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLN 231
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 65.3 bits (152), Expect = 2e-11
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D+VLD +R+ A++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 159 YGKKSKLEFSIYPAPQVSTAVVEP 182
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 184 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLN 226
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 65.3 bits (152), Expect = 2e-11
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D+VLD +R+ A++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 159 YGKKSKLEFSIYPAPQVSTAVVEP 182
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 184 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLN 226
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 65.3 bits (152), Expect = 2e-11
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D+VLD +R+ A++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 159 YGKKSKLEFSIYPAPQVSTAVVEP 182
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 184 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLN 226
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 64.5 bits (150), Expect = 3e-11
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D+ LD +R+ A +C+ LQGF ++ E
Sbjct: 98 NNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAE 157
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P++S +VVEP
Sbjct: 158 YGKKSKLEFSIYPAPQISTSVVEP 181
Score = 54.0 bits (124), Expect = 4e-08
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+YDIC R L++S PTY +LN
Sbjct: 183 NSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLN 225
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 63.7 bits (148), Expect = 5e-11
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D+ LD +R+ A++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 159 YGKKSKLEFSIYPAPQVSTAVVEP 182
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 184 NSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLN 226
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 63.7 bits (148), Expect = 5e-11
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D+ LD +R+ A++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 159 YGKKSKLEFSIYPAPQVSTAVVEP 182
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 184 NSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLN 226
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 63.3 bits (147), Expect = 7e-11
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D+VLD +R+ A++C LQGF ++ +
Sbjct: 99 NNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+V VVEP
Sbjct: 159 YGKKSKLEFSIYPAPQVCTAVVEP 182
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 184 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLN 226
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D V+D VR+ E C LQGF ++ +
Sbjct: 101 NNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSID 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P++S ++VEP
Sbjct: 161 YGKKAKLEFSIYPAPQISTSMVEP 184
Score = 39.9 bits (89), Expect = 7e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+Y+I L + +PTY LN
Sbjct: 186 NSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLN 228
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D LD +R+ A++C LQGF ++ +
Sbjct: 101 NNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 161 YGKKAKLEFSIYPAPQVSTAVVEP 184
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN
Sbjct: 186 NSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLN 228
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D LD +R+ A++C LQGF ++ +
Sbjct: 100 NNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 159
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 160 YGKKAKLEFSIYPAPQVSTAVVEP 183
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN
Sbjct: 185 NSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLN 227
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D LD +R+ A++C LQGF ++ +
Sbjct: 101 NNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 161 YGKKAKLEFSIYPAPQVSTAVVEP 184
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN
Sbjct: 186 NSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLN 228
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D LD +R+ A++C LQGF ++ +
Sbjct: 101 NNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +S+ P+P+VS VVEP
Sbjct: 161 YGKKAKLEFSIYPAPQVSTAVVEP 184
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN
Sbjct: 186 NSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLN 228
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 58.8 bits (136), Expect = 1e-09
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D V+D VR+ E+C LQGF ++ +
Sbjct: 106 NNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVD 165
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + + + P+P+VS ++VEP
Sbjct: 166 YGKKSKLEFCIYPAPQVSTSMVEP 189
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D ++ +DNEA+YDIC R L L+ PTY +LN
Sbjct: 191 NSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLN 233
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 55.6 bits (128), Expect = 1e-08
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
N +A+G YT G E++D V+D V++ AE+C+ LQGF ++ E
Sbjct: 107 NCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTE 166
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P+VS ++VEP
Sbjct: 167 YGKKPKLEFAIYPAPQVSTSMVEP 190
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +LN
Sbjct: 192 NSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLN 234
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 55.6 bits (128), Expect = 1e-08
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
N +A+G YT G E++D V+D V++ AE+C+ LQGF ++ E
Sbjct: 79 NCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTE 138
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P+VS ++VEP
Sbjct: 139 YGKKPKLEFAIYPAPQVSTSMVEP 162
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +LN
Sbjct: 164 NSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLN 206
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 51.2 bits (117), Expect = 3e-07
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWA G Y +G E+ + ++D++ +EAE+ + L G ++RE
Sbjct: 104 NNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREA 162
Query: 183 YPDRIMNTYSVVPSPKVS-DTVVEP 254
+P +++ TYSV + S D VV P
Sbjct: 163 FPKKVIQTYSVFANSDTSTDVVVHP 187
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N LS+ +L+EN D +DN AL+ + K TPT+ +N
Sbjct: 189 NWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHIN 231
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 51.2 bits (117), Expect = 3e-07
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWA G Y +G E+ + ++D++ +EAE+ + L G ++RE
Sbjct: 104 NNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREA 162
Query: 183 YPDRIMNTYSVVPSPKVS-DTVVEP 254
+P +++ TYSV + S D VV P
Sbjct: 163 FPKKVIQTYSVFANSDTSTDVVVHP 187
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N LS+ +L+EN D +DN AL+ + K TPT+ +N
Sbjct: 189 NWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHIN 231
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.047
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 104 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTDNATLSVH 277
+PT + H + YG PP + VP + C++ ++ H SRT +AT ++
Sbjct: 529 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALD 588
Query: 278 QL 283
QL
Sbjct: 589 QL 590
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 33.9 bits (74), Expect = 0.047
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 104 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTDNATLSVH 277
+PT + H + YG PP + VP + C++ ++ H SRT +AT ++
Sbjct: 542 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALD 601
Query: 278 QL 283
QL
Sbjct: 602 QL 603
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 33.9 bits (74), Expect = 0.047
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 104 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTDNATLSVH 277
+PT + H + YG PP + VP + C++ ++ H SRT +AT ++
Sbjct: 541 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALD 600
Query: 278 QL 283
QL
Sbjct: 601 QL 602
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 33.9 bits (74), Expect = 0.047
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 104 IPTDTLARRRH--RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSSRTDNATLSVH 277
+PT + H + YG PP + VP + C++ ++ H SRT +AT ++
Sbjct: 544 VPTSSQENLNHGRMYGYGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALD 603
Query: 278 QL 283
QL
Sbjct: 604 QL 605
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 150 PYRNRCRRRASVSVGIPGGNHTIPLPF 70
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 150 PYRNRCRRRASVSVGIPGGNHTIPLPF 70
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 150 PYRNRCRRRASVSVGIPGGNHTIPLPF 70
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 150 PYRNRCRRRASVSVGIPGGNHTIPLPF 70
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z81457-2|CAB03814.1| 191|Caenorhabditis elegans Hypothetical
protein C01G12.3 protein.
Length = 191
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 180 EYPDRIMNTYSVVPSPKVSDTVVEPTTPHFQFIN*LKTQTKPTVSTTRLSTI 335
E PD ++ YSV +P V P+ PH + + +P +T R++ +
Sbjct: 74 EIPDEWVDDYSVPVAPVVHKEQEPPSAPH-SYYELMDLNAEPVNNTVRMARV 124
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 189 DRIMNTY-SVVPSPKVSDTVV---EPTTPHFQFIN*LKTQTKPTVSTTRL 326
+R M Y +++ +P + + PTTP+ FIN +K T P S L
Sbjct: 463 ERAMRQYMNIIGNPDIRPVITVEFRPTTPNSVFINDVKYTTNPNQSAQAL 512
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +3
Query: 225 PKVSDTVVEPTTPHFQFIN*LKTQTKPTVSTTRLSTISASAR*NYPHPHTAT*T 386
PK S T TTP T T PT +TT +T + + P T T T
Sbjct: 83 PKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTT 136
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -3
Query: 112 SWNPWRQSHDSASF----RTTSKTESTSSAPS 29
S++ WR+S S S RTTSKT ++SS S
Sbjct: 17 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTS 48
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -3
Query: 112 SWNPWRQSHDSASF----RTTSKTESTSSAPS 29
S++ WR+S S S RTTSKT ++SS S
Sbjct: 21 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTS 52
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -3
Query: 112 SWNPWRQSHDSASF----RTTSKTESTSSAPS 29
S++ WR+S S S RTTSKT ++SS S
Sbjct: 17 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTS 48
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -3
Query: 112 SWNPWRQSHDSASF----RTTSKTESTSSAPS 29
S++ WR+S S S RTTSKT ++SS S
Sbjct: 21 SFSSWRRSSTSGSISQSSRTTSKTTTSSSVTS 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,458,205
Number of Sequences: 27780
Number of extensions: 182032
Number of successful extensions: 593
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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