Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20083
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 142 3e-34
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 139 2e-33
AF077542-12|AAC26293.1| 169|Caenorhabditis elegans Hypothetical... 31 0.75
Z81576-1|CAB04643.2| 312|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 142 bits (343), Expect = 3e-34
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = +1
Query: 256 DGDEMTRIMWAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDSAHAILKHNVGIKC 435
DGDEMTRI+W +IK +LI PY+ +D Y+DLGL +RD T+DQVTID+AHAIL+H+VGIKC
Sbjct: 37 DGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKC 96
Query: 436 ATITPDEQRVEEFKLKKMWLSPNG 507
ATITPDE R++EF LKKMWLSPNG
Sbjct: 97 ATITPDEARIKEFNLKKMWLSPNG 120
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +3
Query: 498 PERKIRNILGGTVFREPILCQSIPRVVPGWTKPIVIGRHAHGDQYKAQDFVVP 656
P IRNILGGTVFREPILC++IPR+VPGWT+PI IGRHA GDQYK D V+P
Sbjct: 118 PNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAFGDQYKCTDLVIP 170
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 139 bits (336), Expect = 2e-33
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +1
Query: 259 GDEMTRIMWAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDSAHAILKHNVGIKCA 438
GDEMTRI+W IKE+LI PYV ++ +FDLG+ HRDATDDQVTID+A+A LK+NV +KCA
Sbjct: 16 GDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCA 75
Query: 439 TITPDEQRVEEFKLKKMWLSPNG 507
TITPDE RVEEFKLKKMW SPNG
Sbjct: 76 TITPDEARVEEFKLKKMWKSPNG 98
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = +3
Query: 498 PERKIRNILGGTVFREPILCQSIPRVVPGWTKPIVIGRHAHGDQYKAQDFVVPKPGKVE 674
P IRNILGGTVFREPI+ +++PR+V W+KPI+IGRHAH DQYKA DFVVP GK+E
Sbjct: 96 PNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAHADQYKATDFVVPGAGKLE 154
>AF077542-12|AAC26293.1| 169|Caenorhabditis elegans Hypothetical
protein Y57G7A.9 protein.
Length = 169
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 373 DDQVTIDSAHAILKHNVGIKCATITPDEQRVE 468
+DQ + H I K N GI+CA + P+ Q E
Sbjct: 29 NDQYFQEVIHRICKRNEGIRCAMLAPNAQHAE 60
>Z81576-1|CAB04643.2| 312|Caenorhabditis elegans Hypothetical
protein R10E8.1 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 DGDEMTRIM-WAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDSAHAILKHNVGIK 432
D D +T++ W +IK LI ++ L L LP T +TI + + KH +G+K
Sbjct: 172 DCDGLTKLPHWKRIKSLLIEGFIVSAPLEHFLHLPEVTITMQSITIFNLKLLKKHFLGLK 231
>Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical
protein C09H10.3 protein.
Length = 479
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 160 NKNSKVCKPVCITD*KLWNC*ESCGC*TSCREDGDEMTRIMW 285
NK + + K CI L+ ESCG T CRE + + ++MW
Sbjct: 369 NKQTDIVK--CIARLSLFYKHESCGQCTPCREGCNWLNKMMW 408
>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical
protein R06A4.8 protein.
Length = 1467
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 584 TRHNPRDTLTQYRFAEYCTAQNVTDLPFGLSHI 486
TRHNPR T + ++N D P GL HI
Sbjct: 718 TRHNPRTHETVVVVSHTSFSKNYIDWPGGLKHI 750
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 355 PHR---DATDDQVTIDSAHAILKHNVGIKCATITPDEQR 462
PHR DD++ +D + ++LK ++C ++ E+R
Sbjct: 97 PHRLLVKEWDDRILVDKSQSVLKAETKLECLSLCAQEKR 135
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 355 PHR---DATDDQVTIDSAHAILKHNVGIKCATITPDEQR 462
PHR DD++ +D + ++LK ++C ++ E+R
Sbjct: 97 PHRLLVKEWDDRILVDKSQSVLKAETKLECLSLCAQEKR 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,401,143
Number of Sequences: 27780
Number of extensions: 316666
Number of successful extensions: 753
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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