Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20081
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 95 4e-20
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 95 4e-20
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 81 7e-16
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 81 7e-16
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 81 7e-16
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 79 2e-15
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 79 2e-15
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 64 1e-10
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 64 1e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 59 3e-09
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 51 8e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 51 8e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 51 8e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 46 3e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 45 4e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 45 5e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 45 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 44 9e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 9e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 44 1e-04
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 44 1e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 44 1e-04
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 44 1e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 6e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 6e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 40 0.001
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 40 0.001
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 40 0.001
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 40 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.001
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.001
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.001
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.002
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 40 0.002
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.002
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.003
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 39 0.003
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.003
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.005
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 38 0.006
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.008
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.008
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.008
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.008
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.008
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.008
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.008
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.024
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 36 0.024
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 35 0.042
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 35 0.042
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 34 0.098
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.17
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.23
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.30
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.30
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 0.52
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 0.52
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.69
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 31 0.69
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.2
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.2
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.2
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 1.6
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 30 1.6
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 1.6
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.1
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 29 2.8
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 29 2.8
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 6.4
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 8.5
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 190 GEHTINNKKVDPKKA--KARHGKILSEDSAV 276
EH ++ KK+DPK A K K++++ V
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKV 136
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 187 AGEHTINNKKVDPKKAKAR 243
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/76 (32%), Positives = 48/76 (63%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS+ + ++++ +F +G + + + FDK + +GF F+TF+S++V + + +
Sbjct: 137 FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHF 196
Query: 435 RTIGGKEVDVKRATPK 482
I GK V+ K+A PK
Sbjct: 197 HEINGKMVECKKAQPK 212
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS + + + +R++F FG + E + D + +GF FITF V+ +L +
Sbjct: 48 FIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE 107
Query: 435 RTIGGKEVDVKRATPK 482
+ GK++D K A PK
Sbjct: 108 HELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 190 GEHTINNKKVDPKKA--KARHGKILSEDSAV 276
EH ++ KK+DPK A K K++++ V
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKV 136
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 187 AGEHTINNKKVDPKKAKAR 243
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/76 (32%), Positives = 48/76 (63%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS+ + ++++ +F +G + + + FDK + +GF F+TF+S++V + + +
Sbjct: 137 FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHF 196
Query: 435 RTIGGKEVDVKRATPK 482
I GK V+ K+A PK
Sbjct: 197 HEINGKMVECKKAQPK 212
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS + + + +R++F FG + E + D + +GF FITF V+ +L +
Sbjct: 48 FIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE 107
Query: 435 RTIGGKEVDVKRATPK 482
+ GK++D K A PK
Sbjct: 108 HELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/96 (41%), Positives = 53/96 (55%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 190 GEHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKS 297
H I+ K VDPK+A R K SE + ++ S
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVS 119
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 26 FVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP 85
Query: 435 RTIGGKEVDVKRATPKPD 488
I GK VD KRA P+ D
Sbjct: 86 HIIDGKTVDPKRAVPRDD 103
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 187 AGEHTINNKKVDPKKAKARHGKILSEDSAVKSQM 288
H +N + D +K LS+D K+QM
Sbjct: 174 QKSHMVNGHRCDVRKG-------LSKDEMSKAQM 200
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 117 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 176
Query: 435 RTIGGKEVDVKRATPKPD 488
+ G DV++ K +
Sbjct: 177 HMVNGHRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/96 (41%), Positives = 53/96 (55%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 190 GEHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKS 297
H I+ K VDPK+A R K SE + ++ S
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVS 119
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 26 FVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP 85
Query: 435 RTIGGKEVDVKRATPKPD 488
I GK VD KRA P+ D
Sbjct: 86 HIIDGKTVDPKRAVPRDD 103
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 187 AGEHTINNKKVDPKKAKARHGKILSEDSAVKSQM 288
H +N + D +K LS+D K+QM
Sbjct: 174 QKSHMVNGHRCDVRKG-------LSKDEMSKAQM 200
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 117 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 176
Query: 435 RTIGGKEVDVKRATPKPD 488
+ G DV++ K +
Sbjct: 177 HMVNGHRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/96 (41%), Positives = 53/96 (55%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 190 GEHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKS 297
H I+ K VDPK+A R K SE + ++ S
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVS 119
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 26 FVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP 85
Query: 435 RTIGGKEVDVKRATPKPD 488
I GK VD KRA P+ D
Sbjct: 86 HIIDGKTVDPKRAVPRDD 103
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 187 AGEHTINNKKVDPKKAKARHGKILSEDSAVKSQM 288
H +N + D +K LS+D K+QM
Sbjct: 174 QKSHMVNGHRCDVRKG-------LSKDEMSKAQM 200
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 117 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 176
Query: 435 RTIGGKEVDVKRATPKPD 488
+ G DV++ K +
Sbjct: 177 HMVNGHRCDVRKGLSKDE 194
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/82 (46%), Positives = 49/82 (59%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 187 AGEHTINNKKVDPKKAKARHGK 252
A E TI K V+ K AK+R K
Sbjct: 89 AREQTIKGKSVEVKPAKSRENK 110
Score = 75.8 bits (178), Expect = 2e-14
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI FE E+ + K
Sbjct: 113 FVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTK 172
Query: 435 RTIGGKEVDVKRATPKPDG-PGA 500
+T G +E DVK+A P+ PGA
Sbjct: 173 QTFGTRECDVKKAVPQGKRFPGA 195
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKAS 168
Query: 184 AAGEHTINNKKVDPKKA 234
+ + T ++ D KKA
Sbjct: 169 SQTKQTFGTRECDVKKA 185
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/73 (31%), Positives = 48/73 (65%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L +
Sbjct: 32 FVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE 91
Query: 435 RTIGGKEVDVKRA 473
+TI GK V+VK A
Sbjct: 92 QTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/82 (46%), Positives = 49/82 (59%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 187 AGEHTINNKKVDPKKAKARHGK 252
A E TI K V+ K AK+R K
Sbjct: 89 AREQTIKGKSVEVKPAKSRENK 110
Score = 75.8 bits (178), Expect = 2e-14
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI FE E+ + K
Sbjct: 113 FVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTK 172
Query: 435 RTIGGKEVDVKRATPKPDG-PGA 500
+T G +E DVK+A P+ PGA
Sbjct: 173 QTFGTRECDVKKAVPQGKRFPGA 195
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKAS 168
Query: 184 AAGEHTINNKKVDPKKA 234
+ + T ++ D KKA
Sbjct: 169 SQTKQTFGTRECDVKKA 185
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/73 (31%), Positives = 48/73 (65%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L +
Sbjct: 32 FVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE 91
Query: 435 RTIGGKEVDVKRA 473
+TI GK V+VK A
Sbjct: 92 QTIKGKSVEVKPA 104
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
KLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 190 GEHTINNKKVDPKKAKAR 243
H + K VD K+A R
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 52 FIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRP 111
Query: 435 RTIGGKEVDVKRATPK 482
+GGK VD KRA P+
Sbjct: 112 HKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
KLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 190 GEHTINNKKVDPKKAKAR 243
H + K VD K+A R
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 72 FIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRP 131
Query: 435 RTIGGKEVDVKRATPK 482
+GGK VD KRA P+
Sbjct: 132 HKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
KLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 190 GEHTINNKKVDPKKAKAR 243
H + K VD K+A R
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 73 FIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRP 132
Query: 435 RTIGGKEVDVKRATPK 482
+GGK VD KRA P+
Sbjct: 133 HKLGGKTVDSKRAIPR 148
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +1
Query: 55 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 234
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 235 KARHGKILSEDSAVKSQMMKS 297
R K SE + ++ S
Sbjct: 61 VPRDDKNRSESNVSTKRLYVS 81
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 294 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 473
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 474 TPKPD 488
P+ D
Sbjct: 61 VPRDD 65
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 187 AGEHTINNKKVDPKKAKARHGKILSEDSAVKSQM 288
H +N + D +K LS+D K+QM
Sbjct: 136 QKSHMVNGHRCDVRKG-------LSKDEMSKAQM 162
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 79 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 138
Query: 435 RTIGGKEVDVKRATPKPD 488
+ G DV++ K +
Sbjct: 139 HMVNGHRCDVRKGLSKDE 156
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +1
Query: 55 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 234
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 235 KARHGKILSEDSAVKSQMMKS 297
R K SE + ++ S
Sbjct: 61 VPRDDKNRSESNVSTKRLYVS 81
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +3
Query: 294 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 473
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 474 TPKPD 488
P+ D
Sbjct: 61 VPRDD 65
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 187 AGEHTINNKKVDPKKAKARHGKILSEDSAVKSQM 288
H +N + D +K LS+D K+QM
Sbjct: 136 QKSHMVNGHRCDVRKG-------LSKDEMSKAQM 162
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 79 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 138
Query: 435 RTIGGKEVDVKRATPKPD 488
+ G DV++ K +
Sbjct: 139 HMVNGHRCDVRKGLSKDE 156
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 190 GEHTINNKKVD 222
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGL SD + +F +FG I E + D+ + +G+ F+T + K P
Sbjct: 38 FVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPN 97
Query: 435 RTIGGKEVDVKRA 473
I G++ +V A
Sbjct: 98 PIIDGRKANVNLA 110
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+ +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F + + +K +
Sbjct: 25 QTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
Query: 187 AGEHTINNKKVD 222
H I+ +VD
Sbjct: 85 QRPHVIDGDRVD 96
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 213 ESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
E+RPK T + V ++ + ++ ++F +G+I V M +D +GF ITF
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGK---SQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITF 73
Query: 393 ESEQVVNDLLKTPKRTIGGKEVDVKRATP 479
+S+ N ++ I G VDV+ P
Sbjct: 74 DSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 52.0 bits (119), Expect = 3e-07
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+ +A
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LAL 305
Query: 190 GEHTINNKKVDPKKAKA-RHGKILSEDSAVK-SQMMKSETSSVNLELS*KWRCPLTKQRT 363
TI +K D + K + G + +A K + K + + +L K++ K+RT
Sbjct: 306 SMETIKMEKRDLRITKVMKKGHLTKIQTAKKRTSHGKKNQNEITGKLH-KFKFSTKKERT 364
Query: 364 KER 372
E+
Sbjct: 365 TEQ 367
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEM 341
FVG + +++ +R FS+FGTI V M
Sbjct: 146 FVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
++VG + W++T E+ +HF G++ + + D TG + FAF+ F+ ES+ +
Sbjct: 48 VYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLS 107
Query: 193 EHTINNKKV 219
N+K+
Sbjct: 108 GTMFRNRKI 116
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDK 177
++ +++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S +
Sbjct: 205 KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSE 263
Query: 178 VMA 186
+A
Sbjct: 264 AIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDK 177
++ +++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S +
Sbjct: 205 KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSE 263
Query: 178 VMA 186
+A
Sbjct: 264 AIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDK 177
++ +++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S +
Sbjct: 205 KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSE 263
Query: 178 VMA 186
+A
Sbjct: 264 AIA 266
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 346 YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 432 KRTIGGKEVDVKRATPKPD 488
+ IG K + V A K D
Sbjct: 405 SKMIGAKPLYVALAQRKED 423
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 346 YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 432 KRTIGGKEVDVKRATPKPD 488
+ IG K + V A K D
Sbjct: 405 SKMIGAKPLYVALAQRKED 423
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/52 (38%), Positives = 36/52 (69%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS 91
Score = 41.5 bits (93), Expect = 5e-04
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 41 YIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 401
+VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 8 YVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+ ++VG + + T +E+ HF G + + ++ D +G +GFA++ F E + +A
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 187 AGEHTINNK--KVDPKK 231
+ + + KVDPK+
Sbjct: 138 MTDSLLRGRQIKVDPKR 154
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+VG + + +EI F G++ V + D+ KGF ++ F ++ + + L
Sbjct: 81 YVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTD 140
Query: 435 RTIGGKEVDV-KRATPKP 485
+ G+++ V + T KP
Sbjct: 141 SLLRGRQIKVDPKRTNKP 158
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L V LS TT+K+LRD FG +GEI ++ D +G SRGF FI F E
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 258 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
RH +FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 181 M 183
+
Sbjct: 80 I 80
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 25 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 84
Query: 432 KRTIGGKEVDVKRATPKP 485
+ +G + + AT KP
Sbjct: 85 GQWLGRRTIRTNWATRKP 102
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 131 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 183
Query: 432 KRTIGGKEV 458
+ +GG+ V
Sbjct: 184 NQDVGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
RH +FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 181 M 183
+
Sbjct: 90 I 90
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 35 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 94
Query: 432 KRTIGGKEVDVKRATPKP 485
+ +G + + AT KP
Sbjct: 95 GQWLGRRTIRTNWATRKP 112
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 141 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 193
Query: 432 KRTIGGKEV 458
+ +GG+ V
Sbjct: 194 NQDVGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
RH +FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 181 M 183
+
Sbjct: 193 I 193
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 138 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 197
Query: 432 KRTIGGKEVDVKRATPKP 485
+ +G + + AT KP
Sbjct: 198 GQWLGRRTIRTNWATRKP 215
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 244 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 296
Query: 432 KRTIGGKEV 458
+ +GG+ V
Sbjct: 297 NQDVGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
RH +FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 181 M 183
+
Sbjct: 161 I 161
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 106 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 165
Query: 432 KRTIGGKEVDVKRATPKP 485
+ +G + + AT KP
Sbjct: 166 GQWLGRRTIRTNWATRKP 183
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 212 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 264
Query: 432 KRTIGGKEV 458
+ +GG+ V
Sbjct: 265 NQDVGGQLV 273
Score = 31.1 bits (67), Expect = 0.69
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 359
+VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 213 ESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
E+R K S + FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++
Sbjct: 121 ENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Query: 393 -ESEQVVNDLLKTPKRTIGGKEVDVKRATPKPDGPG 497
E + + +G + + AT KPD G
Sbjct: 181 PRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDG 216
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
RH +FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++
Sbjct: 130 RHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
Query: 181 M 183
+
Sbjct: 190 I 190
Score = 31.1 bits (67), Expect = 0.69
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
+VG +++ + +DEIR F FG I EV + +G+ F+ FE+ E +++
Sbjct: 259 YVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQMN 311
Query: 432 KRTIGGKEV 458
IGG+ V
Sbjct: 312 NADIGGQIV 320
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 21 FVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
+FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 401
+VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 9 YVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 67 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVD-----PK 228
F +G I S V T G+S+GF F+ F PE + V A + TI + +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 229 KAKARHGKILSEDSAVKSQMMKSETSSVNL 318
K RH ++ + K++ M+ + VNL
Sbjct: 291 KKSERHAELKKKHEQHKAERMQ-KYQGVNL 319
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 67 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVD-----PK 228
F +G I S V T G+S+GF F+ F PE + V A + TI + +
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 229 KAKARHGKILSEDSAVKSQMMKSETSSVNL 318
K RH ++ + K++ M+ + VNL
Sbjct: 231 KKSERHAELKKKHEQHKAERMQ-KYQGVNL 259
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 67 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVD-----PK 228
F +G I S V T G+S+GF F+ F PE + V A + TI + +
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 229 KAKARHGKILSEDSAVKSQMMKSETSSVNL 318
K RH ++ + K++ M+ + VNL
Sbjct: 228 KKSERHAELKKKHEQHKAERMQ-KYQGVNL 256
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 165
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 67 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVD-----PK 228
F +G I S V T G+S+GF F+ F PE + V A + TI + +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 229 KAKARHGKILSEDSAVKSQMMKSETSSVNL 318
K RH ++ + K++ M+ + VNL
Sbjct: 291 KKSERHAELKKKHEQHKAERMQ-KYQGVNL 319
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 401
+VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 7 YVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
+ LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI +
Sbjct: 103 YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +3
Query: 156 GPRVNRQGHGCW*THHQQQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEV 335
GP N G+G + Q+ S+T ++ GL +DD +R S++G I
Sbjct: 52 GPFGNSNGYGRYTAPRGDQQHHDSTPLSST-NLYIRGLMPNTNDDLLREMCSKYGNIAST 110
Query: 336 EMPFDKTKNQRKGFCFITFESEQ 404
+ DK N KG+ F+ FES Q
Sbjct: 111 KAIMDKATNNCKGYGFVDFESPQ 133
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TP 431
FVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K TP
Sbjct: 69 FVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKLTP 127
Query: 432 KR 437
K+
Sbjct: 128 KQ 129
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TP 431
FVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K TP
Sbjct: 70 FVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKLTP 128
Query: 432 KR 437
K+
Sbjct: 129 KQ 130
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 258 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 398
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 19 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
V L E + ELRD FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 16 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75
Query: 435 R-TIGGKEVDVKRAT 476
+ GK + V +A+
Sbjct: 76 MIKLYGKPIKVNKAS 90
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
FVG L E+ + + + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 103 FVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 174
++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 26 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 85
Query: 435 R-TIGGKEVDVKRAT 476
+ GK + V +A+
Sbjct: 86 MIKLYGKPIKVNKAS 100
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
FVG L E+ + + + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 113 FVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 174
++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAA 66
Query: 181 MA 186
MA
Sbjct: 67 MA 68
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTP 431
+VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E +
Sbjct: 14 YVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMN 73
Query: 432 KRTIGGKEVDVKRATP 479
+ + GK + V A P
Sbjct: 74 ESELFGKTIRVNFARP 89
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 322 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 168
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 169 IDKVMAAGEHTINN 210
+ K+M+A N
Sbjct: 266 VIKLMSACHRNSQN 279
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQVV 410
FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ V
Sbjct: 208 FVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSV 266
Query: 411 NDLLKTPKR 437
L+ R
Sbjct: 267 IKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 322 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 168
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 169 IDKVMAAGEHTINN 210
+ K+M+A N
Sbjct: 266 VIKLMSACHRNSQN 279
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQVV 410
FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ V
Sbjct: 208 FVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSV 266
Query: 411 NDLLKTPKR 437
L+ R
Sbjct: 267 IKLMSACHR 275
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 108 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 322 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 168
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 169 IDKVMAAGEHTINN 210
+ K+M+A N
Sbjct: 266 VIKLMSACHRNSQN 279
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQVV 410
FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ V
Sbjct: 208 FVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSV 266
Query: 411 NDLLKTPKR 437
L+ R
Sbjct: 267 IKLMSACHR 275
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 190 GEHTINNKK 216
T N K
Sbjct: 63 SNQTFFNSK 71
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 246 WEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
W FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 55 WIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAID 114
Query: 426 TPKRT-IGGKEVDV 464
T + G+ V V
Sbjct: 115 QSNDTDLLGQNVKV 128
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
+FV + E T+ ++ D F YG+I++I++ D TG +G+A + ++ + ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 193 EHTI---NNKKVD 222
T N KVD
Sbjct: 117 NDTDLLGQNVKVD 129
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
+H +FVG LS + +++ L+ F +GE+ V D T +S+G+ F+ F ++ +
Sbjct: 133 KHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENA 192
Query: 181 MA 186
+A
Sbjct: 193 IA 194
Score = 40.7 bits (91), Expect = 9e-04
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
FVG LS ++S++ +++ F++FG + E ++ D + KG+ F++F ++Q
Sbjct: 138 FVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
++VG +S +TTD +LRD F YG+I + + +++ +AF+ ++ E K +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKAI 289
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 25 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 204
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 205 NNKKVD 222
++ ++
Sbjct: 68 GSRYIE 73
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +3
Query: 237 STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 416
ST +E GL E ++ E+R+FF G I +E+P + + G + F +E+ N+
Sbjct: 2 STAYEVQCRGLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNN 58
Query: 417 LLKTPKRTIGGKEVDVKRATPKPDGPG 497
LK + +G + ++V A P G
Sbjct: 59 ALKKDREHLGSRYIEVFPAGGAPTRRG 85
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 25 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 204
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 205 NNKKVD 222
++ ++
Sbjct: 68 GSRYIE 73
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +3
Query: 237 STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 416
ST +E GL E ++ E+R+FF G I +E+P + + G + F +E+ N+
Sbjct: 2 STAYEVQCRGLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNN 58
Query: 417 LLKTPKRTIGGKEVDVKRATPKPDGPG 497
LK + +G + ++V A P G
Sbjct: 59 ALKKDREHLGSRYIEVFPAGGAPTRRG 85
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 110 YIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
L V G+ ++TTD+ + +F G + +K + G S+GF F+ + +KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 193 EHTINNKKVDPKKAKAR 243
+H I+ ++ D K R
Sbjct: 234 QHMIDGRRCDVKVPDGR 250
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 264 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 443
G+ + +D+ + +F + GT++ E+ K+ KGF F+ S N +L P+ I
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMI 237
Query: 444 GGKEVDVK 467
G+ DVK
Sbjct: 238 DGRRCDVK 245
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKV 180
++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ + E+ +++
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSAEAAERI 318
Query: 181 MAAGEHTINNKKVDPKKAKAR 243
++ G T+N V A+ R
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPR 339
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 213 ESRPKEG*STTWEDFVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDK-TKNQRKGFCFI 386
+ R K+G + FVG L+ ++ + ++R F E + +E + D +GF F+
Sbjct: 248 DGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFV 307
Query: 387 TFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 488
T S + ++ T+ G V + A P+ +
Sbjct: 308 TLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 377 FVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 432 KRTIGGKEVDV--KRATP 479
+ GK + V K +TP
Sbjct: 436 GTNLAGKTLQVVFKSSTP 453
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 189
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 190 GEHTINNKKVDPKKAKARHGKILSED---SAVKSQMMKSETSSV 312
+ NK + A+ + +I + S + M E S+
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESI 147
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 174
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+ +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+ +
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 171
L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 291 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 470
++ FFS G + +V + D + KG C++ F E+ V L + + G + ++R
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 171
L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 291 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 470
++ FFS G + +V + D + KG C++ F E+ V L + + G + ++R
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 244
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
L + LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
L + LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVM 183
+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVR 64
Query: 184 AAGEHTINNKKV 219
A + + +++
Sbjct: 65 ARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVM 183
+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVR 64
Query: 184 AAGEHTINNKKV 219
A + + +++
Sbjct: 65 ARDGYEFDGRRI 76
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+++V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAA 109
Query: 190 -GEHTINNKKVDPKKAKARHGKILS 261
E + + ++ ++A K+++
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKLIN 134
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 226
Query: 193 EHTINNKKVDPKKAKARHGK 252
E + + K +GK
Sbjct: 227 EEQDRPIRAGGSRMKIGYGK 246
Score = 33.9 bits (74), Expect = 0.098
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 428
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 228
Query: 429 PKRTI--GGKEVDV 464
R I GG + +
Sbjct: 229 QDRPIRAGGSRMKI 242
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 10 KLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 99
+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 252 RLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 226
Query: 193 EHTINNKKVDPKKAKARHGK 252
E + + K +GK
Sbjct: 227 EEQDRPIRAGGSRMKIGYGK 246
Score = 33.9 bits (74), Expect = 0.098
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 428
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 228
Query: 429 PKRTI--GGKEVDV 464
R I GG + +
Sbjct: 229 QDRPIRAGGSRMKI 242
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 10 KLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 99
+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 252 RLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 203
Query: 193 EHTINNKKVDPKKAKARHGK 252
E + + K +GK
Sbjct: 204 EEQDRPIRAGGSRMKIGYGK 223
Score = 33.9 bits (74), Expect = 0.098
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 428
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 149 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 205
Query: 429 PKRTI--GGKEVDV 464
R I GG + +
Sbjct: 206 QDRPIRAGGSRMKI 219
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 10 KLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 99
+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 229 RLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+++V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAA 109
Query: 190 -GEHTINNKKVDPKKAKARHGKILS 261
E + + ++ ++A K+++
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKLIN 134
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 156
+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+ +K
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 32 FVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 395
F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 127 FIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+ +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 156
+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+ +K
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 32 FVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 395
F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 127 FIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 206 FCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMD 265
Query: 432 KRTIGGKEVDVKRATPK 482
+ +G + + ++++ K
Sbjct: 266 GKYVGNRPIKLRKSAWK 282
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +3
Query: 237 STTWED---FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 407
STT E FV + + +DDE++ FS+FGT+ V K + KG F+ F++E
Sbjct: 677 STTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEAS 735
Query: 408 VNDLLKT-PKRTIGGKEVDVKRATP 479
+ + K + +E++V + P
Sbjct: 736 AQKCVASGDKLMLRERELEVALSNP 760
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 145 FIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 294 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 145 FIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 145 FIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 145 FIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 145 FIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
P E + + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+FVG + + + + R F YG + S N+ D +T S+G F+ F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 145 FIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 294 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 324
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 269 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 327
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 272 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/96 (25%), Positives = 47/96 (48%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAF--- 299
Query: 193 EHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKSE 300
++N +D ++ + +S++ K + + E
Sbjct: 300 -FKMDNVLIDDRRIHVDFSQSVSQNYKYKPKSQQQE 334
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/96 (25%), Positives = 47/96 (48%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAF--- 299
Query: 193 EHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKSE 300
++N +D ++ + +S++ K + + E
Sbjct: 300 -FKMDNVLIDDRRIHVDFSQSVSQNYKYKPKSQQQE 334
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/96 (25%), Positives = 47/96 (48%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAF--- 230
Query: 193 EHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKSE 300
++N +D ++ + +S++ K + + E
Sbjct: 231 -FKMDNVLIDDRRIHVDFSQSVSQNYKYKPKSQQQE 265
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
+VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 40 YVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 193 EHTINNKKVDPKKAKA 240
I+N ++D + +A
Sbjct: 96 -QNISNTRMDDRVIRA 110
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.9 bits (79), Expect = 0.024
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +1
Query: 13 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 181 MAAGEHTINNKKVDPKKAKARHGKILSEDSAVKS 282
A E + N + K+ R G+ ++ +A S
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGEPQAKRAADNS 321
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I A
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAKTAC 74
Query: 193 EH 198
EH
Sbjct: 75 EH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYG 81
K+FVGG+ W+ T+ L+D FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 422
+VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 12 YVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.056
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 6 YIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLN 57
Query: 435 -RTIGGKEVDVKRATPKPDG 491
+ +GG+ V + + P+ G
Sbjct: 58 GKELGGERVILDYSKPRGGG 77
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/81 (19%), Positives = 37/81 (45%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 190 GEHTINNKKVDPKKAKARHGK 252
H +N K++ ++ + K
Sbjct: 54 --HDLNGKELGGERVILDYSK 72
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.056
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 6 YIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLN 57
Query: 435 -RTIGGKEVDVKRATPKPDG 491
+ +GG+ V + + P+ G
Sbjct: 58 GKELGGERVILDYSKPRGGG 77
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/81 (19%), Positives = 37/81 (45%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 190 GEHTINNKKVDPKKAKARHGK 252
H +N K++ ++ + K
Sbjct: 54 --HDLNGKELGGERVILDYSK 72
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.056
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 6 YIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLN 57
Query: 435 -RTIGGKEVDVKRATPKPDG 491
+ +GG+ V + + P+ G
Sbjct: 58 GKELGGERVILDYSKPRGGG 77
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/81 (19%), Positives = 37/81 (45%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 190 GEHTINNKKVDPKKAKARHGK 252
H +N K++ ++ + K
Sbjct: 54 --HDLNGKELGGERVILDYSK 72
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.098
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 13 LFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+F+GG+ T ++L R G YG++ + + DP +G A + F ++ + ++
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISG 426
Query: 190 G----EHTINNKKVDPK 228
H NNK+V+ K
Sbjct: 427 RFVQVNHAENNKRVEIK 443
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEI 87
K+F+GGL + +++++ FGA+G++
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 162
+F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
HE ++VG + + + L F G+I + + DP +G SRG+AF+ +
Sbjct: 200 HE-IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMP 344
FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 91 FVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 195 THHQQQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 374
T Q + PK+ + FVG L +E+ + E++ FS G I E + KG
Sbjct: 99 TESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKG 151
Query: 375 FCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRA 473
F F+ ++ + R I G++V V+ A
Sbjct: 152 FAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 195 THHQQQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 374
T Q + PK+ + FVG L +E+ + E++ FS G I E + KG
Sbjct: 99 TESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKG 151
Query: 375 FCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRA 473
F F+ ++ + R I G++V V+ A
Sbjct: 152 FAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFA 185
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.52
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 190 -GEHTINNKKVDPKKAKAR-HGKILSEDSAVKSQMMKSETSSVNLELS*KWRCPLTKQRT 363
TI ++V+ A R H K +V M ++ + ++ + + L +Q
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNKKAKPLMSVGVDAMSAQNALISQQQQIQRAALLQQQLL 218
Query: 364 KERASVSSHLNL 399
++ V H L
Sbjct: 219 AQQFLVPRHQQL 230
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.52
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 190 -GEHTINNKKVDPKKAKAR-HGKILSEDSAVKSQMMKSETSSVNLELS*KWRCPLTKQRT 363
TI ++V+ A R H K +V M ++ + ++ + + L +Q
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNKKAKPLMSVGVDAMSAQNALISQQQQIQRAALLQQQLL 218
Query: 364 KERASVSSHLNL 399
++ V H L
Sbjct: 219 AQQFLVPRHQQL 230
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.69
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 207 QQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCF 383
QQ S+ K S FVG +S + SD+ IR +E G + + K Q GFC
Sbjct: 37 QQSSQQKPDSSPV---FVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCH 93
Query: 384 ITFESEQVVNDLLKTPKRTIGGKEVDVK 467
T + E + L + +G K++ VK
Sbjct: 94 FT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.69
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 207 QQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCF 383
QQ S+ K S FVG +S + SD+ IR +E G + + K Q GFC
Sbjct: 37 QQSSQQKPDSSPV---FVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCH 93
Query: 384 ITFESEQVVNDLLKTPKRTIGGKEVDVK 467
T + E + L + +G K++ VK
Sbjct: 94 FT-DLEGTLRALRILHEFHLGDKKLTVK 120
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/81 (28%), Positives = 45/81 (55%)
Frame = +1
Query: 166 SIDKVMAAGEHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKSETSSVNLELS*KWRCP 345
SID+V +A +H + N+KVD +K ++ GK++ + ++ + + NLE S +
Sbjct: 135 SIDEVSSAVQH-LENEKVDVEKRQSSTGKLIFQTEKEIMKLKEEIQVNTNLE-SNIIQLS 192
Query: 346 LTKQRTKERASVSSHLNLSKL 408
L K + + +S S ++ +KL
Sbjct: 193 LEKLSSVKDSSTSENVYKAKL 213
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 7 EKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D ++
Sbjct: 31 KRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDVLL 88
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 285 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 407
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-P 431
+VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 6 YVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALD 60
Query: 432 KRTIGGKEVDVKRATPKPDGPG 497
I G V+ +T + G G
Sbjct: 61 GSRICGVRARVELSTGQRRGGG 82
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-P 431
+VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 6 YVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALD 60
Query: 432 KRTIGGKEVDVKRATPKPDGPG 497
I G V+ +T + G G
Sbjct: 61 GSRICGVRARVELSTGQRRGGG 82
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-P 431
+VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 6 YVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALD 60
Query: 432 KRTIGGKEVDVKRATPKPDGPG 497
I G V+ +T + G G
Sbjct: 61 GSRICGVRARVELSTGQRRGGG 82
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 156
+ +++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 16 NRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 330 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 473
++ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 195 THHQQQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILE 332
T Q + PK+ + FVG L +E+ + E++ FS G I E
Sbjct: 99 TESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIES------INVKTDPNTGRSRGFAFIVF 153
E +FV G+S + + D F G+I I + TD NTG +G I F
Sbjct: 201 ETVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITF 255
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 436 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 323
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 16 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 183
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 353
+VG L S +++D I F++ G++ + ++ FD+
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 19 VGGLSWETTDKELRDHFGAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPESI 171
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Frame = +1
Query: 10 KLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFIVFK 156
K+++GG++ E + E++ F YGEIE + V PN FAFI +
Sbjct: 327 KIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFITMR 386
Query: 157 APESIDKVMAA 189
+ + A
Sbjct: 387 NKAGVKAIFEA 397
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 5 YIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV---- 52
Query: 435 RTIGGKEV 458
+ GKE+
Sbjct: 53 HDLNGKEL 60
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 127 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKILSEDSAV 276
SRGF IVF A ++++V G H +N+ K K K H +++ A+
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYHMLTYADEFAI 536
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 94 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGKILSED 267
++V+ N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 9 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPL 68
Query: 268 SAVKSQMMKSETSSVNLELS*KWRCPLTKQRTKERASVSSHLNL 399
+V M ++ + ++ + + L +Q ++ V H L
Sbjct: 69 MSVGVDAMSAQNALISQQQQIQRAALLQQQLLAQQFLVPRHQQL 112
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 124 CLCLDLSLH*YSLFHRMLQNDHGAPYLWSP-SSAHQQKVSR 5
C+ +++++ +SLF +++ H W P S +H+++ SR
Sbjct: 548 CMLAEMAMNEFSLFSGIVEKFHAIVGPWMPESESHRRRASR 588
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+LF+ L + +L++ F + +I+ ++ PN S+ AFI F E A
Sbjct: 639 QLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVEDAQAAFAK 695
Query: 190 GEH-TINNKKVDPKKAKARHGKI 255
+NN VD A+ + K+
Sbjct: 696 SNGLKVNNHLVDVFYARHQETKV 718
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 175 KVMAAGEHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKSETSSVNLELS*KWRCPLTK 354
K+ AA E + D KK K KI ++ V+ + KSE E+ + L
Sbjct: 989 KIKAAEEERRKERAEDAKKVKEGQEKIAILNAKVQEKEDKSEARRKQKEMDNEAEKLLNV 1048
Query: 355 QRTKERASVSSHLNLSK 405
++ KE+ + +SK
Sbjct: 1049 EKEKEKRKIIEKWIMSK 1065
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 104 RQIQTQADHEGLPSLCLR 157
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,773,274
Number of Sequences: 27780
Number of extensions: 255033
Number of successful extensions: 1006
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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