Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30299.Seq
         (835 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z46787-6|CAA86744.1|  392|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA...    28   9.5  
U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA...    28   9.5  
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen...    28   9.5  
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 469 AILEALHSRQTLLYGVKITDVKVDKLTTFFENFEFDASNSVYFSK 603
           +I E     + +L+G+ ++   +DKL    ENFEF A N+  + K
Sbjct: 114 SIREFYPHHKYILHGLNLSAAYIDKLPRNDENFEFRAFNTSTYPK 158


>Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical
           protein C43F9.6 protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 335 LGAAPMPFDKYTFMPSAMDFYQTSLRDPAFYQLY--NRIVXYIVEFKQYLKPYT 490
           LG AP    K +F P+   F +   ++   + +Y  +  V Y++ +KQ LK Y+
Sbjct: 146 LGGAP----KVSFDPNPRQFLEDGTKNAMSWNIYEFSTYVNYLIRYKQVLKKYS 195


>Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical
           protein H13N06.2 protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 169 SSSKRTTLKPSDKKLISTTRKPLTSSATTA 258
           SS   TT+ P    + +TT KP+T   TT+
Sbjct: 217 SSEFTTTMTPESSSVTTTTAKPVTEPITTS 246


>Z46787-6|CAA86744.1|  392|Caenorhabditis elegans Hypothetical
           protein C16C10.6 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 204 QKIDFHDPKAINFVGNYGKIMQICMEKKSQ 293
           QK +  DP   ++ GNY +I  I  EKK +
Sbjct: 61  QKAEAEDPTIFDYDGNYDEIQAIKNEKKEE 90


>U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform b protein.
          Length = 583

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = -1

Query: 484 RLQVLLELNDVXHNSVVELIESRITKRSLVKVHCTRHESVLVEWHRRST*HT 329
           R++VL +L      ++      R +K+ + K+ C + + +  EW +    HT
Sbjct: 528 RIEVLQDLQKNGETTLKNAPVERKSKKKMRKIDCEQKKKIATEWSKFKKWHT 579


>U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform a protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = -1

Query: 484 RLQVLLELNDVXHNSVVELIESRITKRSLVKVHCTRHESVLVEWHRRST*HT 329
           R++VL +L      ++      R +K+ + K+ C + + +  EW +    HT
Sbjct: 541 RIEVLQDLQKNGETTLKNAPVERKSKKKMRKIDCEQKKKIATEWSKFKKWHT 592


>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
            autosome protein2 protein.
          Length = 1758

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 775  SNVESIPLPSYXGPQXDFGQQRHWRH-XNHPQ 683
            S   S+ LPS   P   FG Q++ +H   HPQ
Sbjct: 1435 STASSVGLPSLASPGEQFGYQQYSQHPQQHPQ 1466


>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
           protein Y48G9A.1 protein.
          Length = 1725

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -1

Query: 439 VVEL-IESRITKRSLVKVHCTRHESV 365
           VVEL IE  I+K  LV++H  RH+ +
Sbjct: 145 VVELGIEQSISKEILVRIHVARHDPI 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,464,573
Number of Sequences: 27780
Number of extensions: 357168
Number of successful extensions: 1094
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)