Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30296.Seq
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 105 3e-23
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 8.2
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 8.2
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 118 bits (284), Expect = 4e-27
Identities = 48/95 (50%), Positives = 70/95 (73%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + + I++SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+LKPYF+EAYRP+H+ D F
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIF 158
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/63 (66%), Positives = 55/63 (87%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 251 TVA 259
+VA
Sbjct: 73 SVA 75
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGE 611
V+ MR VEFKVVET+P+P CIV+PDT+IH +G+
Sbjct: 160 VQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGD 193
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 105 bits (253), Expect = 3e-23
Identities = 47/95 (49%), Positives = 67/95 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/63 (63%), Positives = 56/63 (88%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGE 611
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGD 192
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 105 bits (253), Expect = 3e-23
Identities = 47/95 (49%), Positives = 67/95 (70%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
+ +G+ + IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTF 507
PIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/63 (63%), Positives = 56/63 (88%)
Frame = +2
Query: 71 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 250
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 251 TVA 259
TV+
Sbjct: 73 TVS 75
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGE 611
V+ MR VEFKVVETDP+P CIVAPDTVIH +G+
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGD 192
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 85 IIRAFIICHFIQNLLLESKNYYNFY 11
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +1
Query: 373 VKYGKRVHILPIDDSVEGLTGNLFEV-YLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWS 549
+K +R+ + D + L + V Y+KP + Y R +T+R+AG S W+
Sbjct: 836 MKEQQRLKKIDADALTKDLDDSFVRVNYMKPKWPNTYILRQRGETYRNAG--KGSMGGWA 893
Query: 550 KQIHHHFASWLLIP-----*YTVTVKPIKT 624
+ W+ +P VTV+ IKT
Sbjct: 894 WVAAKYVEKWIQVPESPKLPLAVTVEEIKT 923
>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical protein
F26H11.2b protein.
Length = 1693
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +1
Query: 373 VKYGKRVHILPIDDSVEGLTGNLFEV-YLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWS 549
+K +R+ + D + L + V Y+KP + Y R +T+R+AG S W+
Sbjct: 836 MKEQQRLKKIDADALTKDLDDSFVRVNYMKPKWPNTYILRQRGETYRNAG--KGSMGGWA 893
Query: 550 KQIHHHFASWLLIP-----*YTVTVKPIKT 624
+ W+ +P VTV+ IKT
Sbjct: 894 WVAAKYVEKWIQVPESPKLPLAVTVEEIKT 923
>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical protein
F26H11.2a protein.
Length = 1691
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +1
Query: 373 VKYGKRVHILPIDDSVEGLTGNLFEV-YLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWS 549
+K +R+ + D + L + V Y+KP + Y R +T+R+AG S W+
Sbjct: 836 MKEQQRLKKIDADALTKDLDDSFVRVNYMKPKWPNTYILRQRGETYRNAG--KGSMGGWA 893
Query: 550 KQIHHHFASWLLIP-----*YTVTVKPIKT 624
+ W+ +P VTV+ IKT
Sbjct: 894 WVAAKYVEKWIQVPESPKLPLAVTVEEIKT 923
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 50 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 199
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 50 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 199
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,291,149
Number of Sequences: 27780
Number of extensions: 353426
Number of successful extensions: 867
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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