Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30292.Seq
         (476 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    81   3e-16
Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical p...    27   7.0  
Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    27   7.0  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     27   7.0  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     27   7.0  
Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    27   9.2  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 39/65 (60%), Positives = 51/65 (78%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    KVLV NVK+L++L+MQ+ KY  EI HGVS+K RK IVERA QL+I++TN  ARLR
Sbjct: 70  PNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLR 129

Query: 420 SQENE 434
           ++E+E
Sbjct: 130 TEESE 134



 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +2

Query: 65  IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSGSRVNT*CPTL 205
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVR   R     PT+
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTI 57



 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 15/30 (50%), Positives = 25/30 (83%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RF+G   MP IG+GS+++TR +LPNG+++
Sbjct: 46  RRFRGMRAMPTIGHGSDRRTRFVLPNGYKK 75


>Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical
           protein C34C6.6b protein.
          Length = 500

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 219 QEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQ 380
           Q+DP  A  W    L H   E + L MQ  + C +I  G       L V +A +
Sbjct: 244 QKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQIDAGNKEALLGLSVSQANE 297


>Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical
           protein C34C6.6a protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 219 QEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQ 380
           Q+DP  A  W    L H   E + L MQ  + C +I  G       L V +A +
Sbjct: 246 QKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQIDAGNKEALLGLSVSQANE 299


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 141 NLEVLTTESAAVQGSILDAQHWLRFQQEDPSYAP 242
           N+E+L+  SA  +  +L+ +H+L F  E     P
Sbjct: 248 NIEILSPRSATFEQFVLEGRHYLTFINERSRVEP 281


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 141 NLEVLTTESAAVQGSILDAQHWLRFQQEDPSYAP 242
           N+E+L+  SA  +  +L+ +H+L F  E     P
Sbjct: 190 NIEILSPRSATFEQFVLEGRHYLTFINERSRVEP 223


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 141 NLEVLTTESAAVQGSILDAQHWLRFQQEDPSYAP 242
           N+E+L+  SA  +  +L+ +H+L F  E     P
Sbjct: 372 NIEILSPRSATFEQFVLEGRHYLTFINERSRVEP 405


>Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical
           protein C46F11.5b protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = +3

Query: 243 KWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRV 395
           +W+P ++ + VK     +   R+ C E+ +G+ +     IVER ++++ R+
Sbjct: 174 RWVPPLIAY-VKHF---IFNFRESCRELVNGIKNWIHVAIVERTKRVAQRI 220


>Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical
           protein C46F11.5a protein.
          Length = 488

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = +3

Query: 243 KWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRV 395
           +W+P ++ + VK     +   R+ C E+ +G+ +     IVER ++++ R+
Sbjct: 174 RWVPPLIAY-VKHF---IFNFRESCRELVNGIKNWIHVAIVERTKRVAQRI 220


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 31  QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 135
           QD  K   + D+RQKE  E Y+  IGS+ +  E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272


>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 422 GAEASGRIRHSDAELLGSFHDQLPLLRRDTMSDLCAVLPVLHHQDF 285
           G E +G   H  A  LG FH Q+   R D ++     +P    Q+F
Sbjct: 282 GCEVTGTAAHEIAHTLGLFHTQMRSDRDDYVTIDLTDVPESSQQNF 327


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,174,034
Number of Sequences: 27780
Number of extensions: 201803
Number of successful extensions: 623
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)