Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30107
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...   176   2e-44
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    57   2e-08
Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical pr...    40   0.003
Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    31   0.92 
U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock prot...    31   0.92 
U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock prot...    31   0.92 
U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock prot...    31   0.92 
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      31   0.92 
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb...    31   1.2  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical ...    29   4.9  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    28   6.5  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    28   6.5  

>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score =  176 bits (428), Expect = 2e-44
 Identities = 84/116 (72%), Positives = 98/116 (84%), Gaps = 2/116 (1%)
 Frame = +3

Query: 246 QMRYYSS--LPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFE 419
           Q+R YSS  LP H +V LPALSPTME G++VSW+KKEGD+LSEGDLLCEIETDKATMGFE
Sbjct: 65  QVRLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFE 124

Query: 420 TPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPASQ 587
           TPEEGYLAKILI  G+K VP+GKLLCIIV ++ DVAAFKDFKDD + +    PA++
Sbjct: 125 TPEEGYLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDDGASSGGSAPAAE 180


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
 Frame = +3

Query: 117 LKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLP 296
           L +A R ++T   S + + +  T+ L    QN  + S+  + +     S +   I V  P
Sbjct: 13  LSRAARQSVTAASSAQPSLQAKTSLLEPLVQNVRITSSANFHMSAVRMSDV---ITVEGP 69

Query: 297 ALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGV 476
           A + ++  G I  W K++GD ++E +L+ EIETDK ++    P+ G + + L+  G K  
Sbjct: 70  AFAESISEGDI-RWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIVEFLVEDGAKVT 128

Query: 477 PVGKLLCII--VGDQNDVAAFKDFKDDSSPATPQ-KPA 581
              KL  +    G  +  A  K+ +  S+PA  + KPA
Sbjct: 129 AKQKLYKLQPGAGGGSSSAPAKE-EPKSAPAKEESKPA 165


>Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK669.4 protein.
          Length = 448

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 24/86 (27%), Positives = 45/86 (52%)
 Frame = +3

Query: 327 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIV 506
           +  W  KEGD +S+ D +CE+++DKA +      +G + K+          VG+ L I V
Sbjct: 47  VKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYHEVDGM-ARVGQAL-IDV 104

Query: 507 GDQNDVAAFKDFKDDSSPATPQKPAS 584
             + +V   +  K +++ ++P+ P S
Sbjct: 105 EIEGNVEEPEQPKKEAASSSPEAPKS 130


>Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical
           protein F14F3.2 protein.
          Length = 670

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +1

Query: 346 RKGTNLVKAIFCARLKLTKQLWALRHLKKVTWPKY*FRPVQRECLSGNYCALLLEIRMML 525
           +KGT +    FC    L   +  LRHL+K  W +   R V    L+ +   ++ E  +  
Sbjct: 32  KKGTVICSECFCFHSYLGPSVSYLRHLRKSAWDEEHIRLV--HALNTSNTNMIWESALYE 89

Query: 526 RHSKISK-MTHHLQHLKNRLVK 588
             +K  K M     H+K + VK
Sbjct: 90  GSTKFQKPMAQDPSHIKEQFVK 111


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = +3

Query: 354 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAF 533
           D+L+   +L EIET+K     E  E+G L  +   +G   + V K+  +     N +   
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384

Query: 534 KDFKDDSSPATPQKPAS 584
            +    +  A  +K  S
Sbjct: 385 TNLTQVTVVAEVEKKGS 401


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = +3

Query: 354 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAF 533
           D+L+   +L EIET+K     E  E+G L  +   +G   + V K+  +     N +   
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384

Query: 534 KDFKDDSSPATPQKPAS 584
            +    +  A  +K  S
Sbjct: 385 TNLTQVTVVAEVEKKGS 401


>U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock protein
           protein 25,isoform c protein.
          Length = 108

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 108 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 287
           SDG    +R ++      E+  + + N+LL HA+++    TPQ TV   Y          
Sbjct: 23  SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 80

Query: 288 NLPALSPTMESGSIVSWE 341
           N   +S T+ +  +++ E
Sbjct: 81  NPEQISSTLSTDGVLTVE 98


>U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock protein
           protein 25,isoform b protein.
          Length = 205

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 108 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 287
           SDG    +R ++      E+  + + N+LL HA+++    TPQ TV   Y          
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 177

Query: 288 NLPALSPTMESGSIVSWE 341
           N   +S T+ +  +++ E
Sbjct: 178 NPEQISSTLSTDGVLTVE 195


>U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock protein
           protein 25,isoform a protein.
          Length = 219

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 20/78 (25%), Positives = 36/78 (46%)
 Frame = +3

Query: 108 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 287
           SDG    +R ++      E+  + + N+LL HA+++    TPQ TV   Y          
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 191

Query: 288 NLPALSPTMESGSIVSWE 341
           N   +S T+ +  +++ E
Sbjct: 192 NPEQISSTLSTDGVLTVE 209


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = +3

Query: 354 DKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAF 533
           D+L+   +L EIET+K     E  E+G L  +   +G   + V K+  +     N +   
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384

Query: 534 KDFKDDSSPATPQKPAS 584
            +    +  A  +K  S
Sbjct: 385 TNLTQVTVVAEVEKKGS 401


>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
            D2023.2 protein.
          Length = 1175

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 321  GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 470
            G ++  + KEGDK+++   L  +   K  M  ++P  G +  I  P GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163


>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
            carboxylase protein.
          Length = 1175

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 321  GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 470
            G ++  + KEGDK+++   L  +   K  M  ++P  G +  I  P GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +3

Query: 318 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPE-EGYLAKILIPAGTKGVPV--GK 488
           +G ++ W+K++GD L+ GD+    E+ K     E  +  G L +++     +G P+  G 
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVEVAKAPGRLQRVV----NEGDPIHPGS 749

Query: 489 LLCIIVGDQNDVAA 530
           +L  +V DQ +  A
Sbjct: 750 VLAKLV-DQTESEA 762


>AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical
           protein W09B6.1b protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 318 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFE 419
           +G ++ W+K++GD L+ GD+    E+ K     E
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVE 727


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 24/101 (23%), Positives = 44/101 (43%)
 Frame = +3

Query: 105 LSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIK 284
           L +G+   I  N+T  +S  L + KV+  + +  + +  + T   T     ++S P  I 
Sbjct: 74  LEEGVNDVIEENVTHVVS--LREAKVSGMMTDLTRFRQEIFTKHLT-----FNSNPESID 126

Query: 285 VNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 407
                +    +S  + +W  +  ++L E D LC  E D  T
Sbjct: 127 AATKNVQNVKQS--LDTWRDRIKERLDEIDRLCTEEGDSLT 165


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 24/101 (23%), Positives = 44/101 (43%)
 Frame = +3

Query: 105 LSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIK 284
           L +G+   I  N+T  +S  L + KV+  + +  + +  + T   T     ++S P  I 
Sbjct: 74  LEEGVNDVIEENVTHVVS--LREAKVSGMMTDLTRFRQEIFTKHLT-----FNSNPESID 126

Query: 285 VNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 407
                +    +S  + +W  +  ++L E D LC  E D  T
Sbjct: 127 AATKNVQNVKQS--LDTWRDRIKERLDEIDRLCTEEGDSLT 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,981
Number of Sequences: 27780
Number of extensions: 336078
Number of successful extensions: 896
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)