Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30067
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   225   3e-59
AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...    70   2e-12
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...    70   2e-12
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    50   1e-06
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...    50   2e-06
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    46   2e-05
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    32   0.38 
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    31   0.87 
U42831-1|AAA83513.2|  614|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    29   2.0  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    29   3.5  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41543-2|AAO21426.1|  359|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41543-1|AAB37022.2|  396|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  225 bits (549), Expect = 3e-59
 Identities = 106/132 (80%), Positives = 119/132 (90%)
 Frame = +3

Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
           DVQF++NLPPILN LEV  RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G P
Sbjct: 81  DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140

Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
           I+IPVG ETLGRI+NVIGEPIDERGPI +   AAIHAEAPEFV+MSV+QEILVTGIKVVD
Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVD 200

Query: 573 LLAPYAKGERLG 608
           LLAPYAKG ++G
Sbjct: 201 LLAPYAKGGKIG 212


>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 32/103 (31%), Positives = 57/103 (55%)
 Frame = +3

Query: 294 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 473
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR+++ +G PID +GPI
Sbjct: 63  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122

Query: 474 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
              + + +  +AP  +     +E +VTG+K VD L P  +G+R
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQR 165


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 32/103 (31%), Positives = 57/103 (55%)
 Frame = +3

Query: 294 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 473
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR+++ +G PID +GPI
Sbjct: 90  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149

Query: 474 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
              + + +  +AP  +     +E +VTG+K VD L P  +G+R
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQR 192


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
 Frame = +3

Query: 306 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 482
           + +N       +GT G+     + + +G  +R PV  + LGRI N  G+PID+  P+  +
Sbjct: 71  ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130

Query: 483 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGERL 605
               I+ +          +E++ TGI  +D++   A+G+++
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKI 171


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = +3

Query: 438 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
           V+G PID +GPI   + + +  +AP  +     +E +VTG+K VD L P  +G+R
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQR 157


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 22/75 (29%), Positives = 41/75 (54%)
 Frame = +3

Query: 381 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 560
           +G   R PV  + LGRI N  G+PID+  P+  +    I+ +     +    +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168

Query: 561 KVVDLLAPYAKGERL 605
             +D++   A+G+++
Sbjct: 169 SAIDVMNSIARGQKI 183


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 345 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
           T G+  G PVL +G P+ + +G   +G I + I  P+ +
Sbjct: 59  TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
 Frame = -1

Query: 565 TFIPVTRISCCTDMSTNSGASA*IAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 401
           TF PVT +S  +  +T +  +       +    P + +  +P T+  M P     + P  
Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527

Query: 400 IRMGEPESSTGCPRTKPSVPS 338
              G P + T  P TKP+VPS
Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548


>U42831-1|AAA83513.2|  614|Caenorhabditis elegans Hypothetical
           protein R11B5.1 protein.
          Length = 614

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 16/60 (26%)
 Frame = -3

Query: 614 QTTQSFSFGIRSEQIDDFYTSYENLL------LHRHVDKL----------WSFSMNSSSL 483
           ++ QS  FG++  Q+ +++ +Y+  L      LH+H+DKL          W+F+M + SL
Sbjct: 426 RSLQSAFFGLKQPQMTEYFIAYDRYLEQELPALHQHLDKLDVRPDLYLIEWTFAMYAKSL 485


>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 339 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 515
           D  +G + G+P+ +D G  ++ P G E + ++ N  GEP+DE         A I +   E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209

Query: 516 FVDMSV 533
             +++V
Sbjct: 210 HAELTV 215


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -1

Query: 526 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 347
           + T  G +A  +A     M  RS    P+T M  P  +         P  S+  PR    
Sbjct: 9   LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68

Query: 346 VPSMAMVRTVFSP 308
            P+ A  +T   P
Sbjct: 69  TPTAAPPKTCAPP 81


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -1

Query: 526 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 347
           + T  G +A  +A     M  RS    P+T M  P  +         P  S+  PR    
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197

Query: 346 VPSMAMVRTVFSP 308
            P+ A  +T   P
Sbjct: 198 TPTAAPPKTCAPP 210


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 454 IGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPSVPSMAMVRTVFS 311
           +G P   + RP    P+        S+TG  RT+P+VP+++  R + S
Sbjct: 284 LGIPAPAVPRPVAGKPST----RSASTTGAARTRPAVPAVSAPRALTS 327


>U41543-2|AAO21426.1|  359|Caenorhabditis elegans Hypothetical
           protein F46H5.3b protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 540 EILVTGIKVVDLLAPYAKGERLGCL 614
           E L+ G+K ++  AP+++ +RLG L
Sbjct: 248 ERLIKGVKTIEKQAPFSRDDRLGWL 272


>U41543-1|AAB37022.2|  396|Caenorhabditis elegans Hypothetical
           protein F46H5.3a protein.
          Length = 396

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 540 EILVTGIKVVDLLAPYAKGERLGCL 614
           E L+ G+K ++  AP+++ +RLG L
Sbjct: 285 ERLIKGVKTIEKQAPFSRDDRLGWL 309


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 322 FGPLPWTVLKA*SVGNLYSTLAHPFVSRWELKPS 423
           FG   +TV  A    NLYS  +   VS W+LKP+
Sbjct: 168 FGSSEYTVDVACDEENLYSLTSAGVVSVWKLKPN 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,751,279
Number of Sequences: 27780
Number of extensions: 312599
Number of successful extensions: 872
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)