Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30065
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.79
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.8
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 30 1.8
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 30 1.8
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 2.4
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 3.2
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 29 4.2
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 4.2
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 28 5.6
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 5.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 5.6
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
TTS+ P +S ST S +++ + + K P P + S P +P + T L
Sbjct: 1378 TTSLAPLSSSLPSTVPSSTQSFSSTSEGSSKASSSPVPSQTSS--TPTNPTGSTESSTLL 1435
Query: 351 TLTQTASGPET--SPASDNLSVPSSDTWDKT*ILSINSSLTLVN-SDTLSDQP 500
+ T + S T S AS + PS+++ + + +SS + V+ S S QP
Sbjct: 1436 SSTISGSTQHTTMSKASSGSTSPSTNSQTGSTVTMGSSSTSGVSTSSASSTQP 1488
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
S V +P T+LT T TAS T P++ ++ S + + + S +SS T V + T ++
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479
Query: 495 QPWVVP 512
P
Sbjct: 480 STSTSP 485
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
S V +P T+LT T TAS T P++ ++ S + + + S +SS T V + T ++
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479
Query: 495 QPWVVP 512
P
Sbjct: 480 STSTSP 485
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 439 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 284
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 439 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 284
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PKPPEL-SPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 425
P PP + SP LP +P +P+T P +SPA + P++ T
Sbjct: 503 PAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQKPTTPT 553
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +3
Query: 288 ELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLS--VPSSDTWDKT*ILSINSS 461
++SP+ P+ P +P +PL + + + P+ +P +++ +P T+ + + S
Sbjct: 1513 KVSPVKRPIPPSIPNEPLDIIPPVPSDNIPDPTPPTNSFGTVLPVPHTFQTSVRVPTQSL 1572
Query: 462 LTLVNSDTLSDQPW---VVPEVEESMTSKPLGMQS 557
+ ++ T+ QP V+P + +S S P G S
Sbjct: 1573 FSSSSTTTVQPQPEKKNVLPSI-DSAPSTPGGNSS 1606
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.2
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 1/125 (0%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
TTS TP +SPS+ T A T + P+ S + + P +TS
Sbjct: 193 TTSTTPNPSSPSTVQS----TTTAEPTSTITSTTVPESSTTS-VVQSTTTAEPTSTITST 247
Query: 351 TLTQTASGPETSP-ASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPEVEES 527
T+ ++++ TS AS +P+S T S++T S V +
Sbjct: 248 TVPESSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTITSTGSSNPPSTSTVPSTTTST 307
Query: 528 MTSKP 542
T KP
Sbjct: 308 TTPKP 312
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPL-T 344
GT +PT A + T + P +T P P +P PV+ P T
Sbjct: 513 GTIGTSPT-APANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTST 571
Query: 345 SLTLTQTASGPETSPASDNLSVPSSDT 425
+ T T T + +T+P + ++ PS+ T
Sbjct: 572 TTTTTTTTTTTQTTPTTPVVTTPSTIT 598
Score = 27.9 bits (59), Expect = 7.4
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 1/126 (0%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVS-PVMPVQPLTS 347
TT PT +P T + P AT P + + P + PV P T+
Sbjct: 482 TTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNPTSSTTA 541
Query: 348 LTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPEVEES 527
T + P T+P ++ + T T + ++ T + T P V +
Sbjct: 542 PTAPVNPTSPTTAPTVPPVTTTTPTTTTST---TTTTTTTTTTTQTTPTTPVVTTPSTIT 598
Query: 528 MTSKPL 545
T++P+
Sbjct: 599 PTTRPV 604
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 523 SSTSGTTQGWSDRVSELTRVSDELIDKIQ 437
S+T T+QG RV +LT DE++++I+
Sbjct: 638 SATPATSQGVLSRVHQLTSQGDEVVERIR 666
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 321 VMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQP 500
V P+T++ T T+ G TSP + V ++ T LS +SS TL ++ T P
Sbjct: 359 VTTTMPVTTVQTTVTSIGTSTSPQA---VVTTTGNPTTTAQLS-SSSKTLTSTQTTQGSP 414
Query: 501 WVVPEVEESMTSKPLGM 551
V + ++S GM
Sbjct: 415 STVSQTTPGVSSASTGM 431
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 285 PELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 413
P++ P LPV + + S+ + + E P SD+ SVP
Sbjct: 344 PKMPPFVLPVETSVGCDNMNSVAIVHSEIDTEFRPMSDSQSVP 386
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 425
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 719
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 425
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 775
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 402 DCLKPAKFPDLTPSV*ELMTLAAAQASPG 316
D +KPA DL PSV + M L A SPG
Sbjct: 286 DKMKPAVLDDLVPSV-DFMGLVKAMISPG 313
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDTWDKT-*ILS 449
P P SP+ LP V P LT+ +S P + S + T KT +LS
Sbjct: 2240 PSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAVSSTATAAPVITTTKTSSVLS 2299
Query: 450 INSSLTLV 473
++ S+ +V
Sbjct: 2300 VSFSMFIV 2307
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 294 SPIYLPVSPVMPVQPLTSLTLTQTAS----GPETSPASDNLSVPSSDT 425
S IYLP V+P +S+ L+ T S P+T PAS +++ ++ T
Sbjct: 502 SSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSATST 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,393,397
Number of Sequences: 27780
Number of extensions: 330820
Number of successful extensions: 1313
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -