Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30055
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical... 79 2e-15
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 32 0.33
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 32 0.33
AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical ... 30 1.0
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 30 1.3
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 30 1.3
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 30 1.3
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.1
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 29 3.1
Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical p... 28 4.0
U39998-4|AAN60511.1| 351|Caenorhabditis elegans Hypothetical pr... 28 4.0
U39998-3|AAO38584.1| 460|Caenorhabditis elegans Hypothetical pr... 28 4.0
U39998-2|AAL00881.1| 484|Caenorhabditis elegans Hypothetical pr... 28 4.0
U39998-1|AAO38583.1| 475|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 28 4.0
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical
protein Y57A10A.29 protein.
Length = 119
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 QPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFY 436
+ ++ ++ARL YQS+KRG+LEND+LL FA++ L +E + YD+LIN +WD+FY
Sbjct: 27 EKIDAKRARLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFY 86
Query: 437 WIVEKKPTPEEFDN-EIMDLLKK 502
++ KK PE+ ++ ++ +KK
Sbjct: 87 YLSNKKSPPEDVESCQVYQKVKK 109
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 140 LNLAYNALKNVKKVAFSSDTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 319
LN++ N ++ FSS +D +Y ++ VE Q EKR A LH + L
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346
Query: 320 NDLL 331
+L
Sbjct: 347 GGVL 350
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 140 LNLAYNALKNVKKVAFSSDTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 319
LN++ N ++ FSS +D +Y ++ VE Q EKR A LH + L
Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346
Query: 320 NDLL 331
+L
Sbjct: 347 GGVL 350
>AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical
protein Y73B3B.2 protein.
Length = 240
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 443 VEKKPTPEEFDNEIMDLLKKHAKNEDKIALRQPRST 550
+ KP+ +FD+E M+LLK N+ KI PR T
Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMPRDT 227
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 254 QQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDW--- 424
Q E ++ HY+ R + ML++++ + L EK + L N+
Sbjct: 690 QSEQEMKQLEAHYE-RAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGLNEQQLH 748
Query: 425 DIFYWIVEKKPTPEEFDN 478
+IF W+ E+K T EE +N
Sbjct: 749 EIFNWVSEEKATREEMEN 766
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 443 VEKKPTPEEFDNEIMDLLKKHAKNEDKIALRQPRST 550
+ KP+ +FD+E M+LLK N+ KI PR T
Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMPRDT 63
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 443 VEKKPTPEEFDNEIMDLLKKHAKNEDKIALRQPRST 550
+ KP+ +FD+E M+LLK N+ KI PR T
Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMPRDT 63
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 464 EEFDNEIMDLLKKHAKNEDKIALRQP 541
+ F E+ DL KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 464 EEFDNEIMDLLKKHAKNEDKIALRQP 541
+ F E+ DL KKH K D I +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 161 LKNVKKVAFSSDTTNNMDTTYMEIPLYDVEKQQP 262
++ + VA+SS T + T Y+EI +DV+ P
Sbjct: 2511 IEQITVVAYSSPTKQSKTTVYLEIGPFDVQPSLP 2544
>Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical
protein Y57G11C.43 protein.
Length = 302
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 YWIVEKKPTPEEFDNEIMD-LLKKHAKNEDKIALRQP 541
+W+ E+KP E + EI+D L+ ++ + + K+ +P
Sbjct: 114 HWLNEQKPEVERYPKEIIDQLMMRYERPDTKLRWEKP 150
>U39998-4|AAN60511.1| 351|Caenorhabditis elegans Hypothetical
protein ZK622.3c protein.
Length = 351
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +2
Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523
SN+W +W+ EK P + NE+++L+K +NE +
Sbjct: 110 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 150
>U39998-3|AAO38584.1| 460|Caenorhabditis elegans Hypothetical
protein ZK622.3d protein.
Length = 460
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +2
Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523
SN+W +W+ EK P + NE+++L+K +NE +
Sbjct: 219 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 259
>U39998-2|AAL00881.1| 484|Caenorhabditis elegans Hypothetical
protein ZK622.3b protein.
Length = 484
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +2
Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523
SN+W +W+ EK P + NE+++L+K +NE +
Sbjct: 243 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 283
>U39998-1|AAO38583.1| 475|Caenorhabditis elegans Hypothetical
protein ZK622.3a protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +2
Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523
SN+W +W+ EK P + NE+++L+K +NE +
Sbjct: 234 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 274
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 299 RKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLIN-SPSNDWDIFYWIVEKK 454
R+RG+ +DL F ++ + NEK ++YD+ S DWD + ++ K
Sbjct: 181 RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPK 233
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 511 FSMFFEKVHNFIVKFFRSWLLFNYPIEYVPIVAG*VYETIVHHSLFFIKTIQILL 347
FSM F + + +F P+ Y P++ + ++HHS IQILL
Sbjct: 78 FSMIFLDIIGRTLVYFTPLCPIIAPMFYEPLIGFKIMMIVLHHSRACKSLIQILL 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,671,699
Number of Sequences: 27780
Number of extensions: 263207
Number of successful extensions: 905
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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