Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30053
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z92780-8|CAI46553.1|  587|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z92780-7|CAI46552.1|  624|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z92780-6|CAI46551.1|  691|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z92780-5|CAI46550.1|  532|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z81068-16|CAJ30230.1|  587|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z81068-15|CAB02980.2|  624|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z81068-14|CAJ30229.1|  691|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z81068-13|CAJ30228.1|  532|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z81068-11|CAB02981.1|  454|Caenorhabditis elegans Hypothetical p...    27   7.3  
EF443133-1|ABO31113.1|  656|Caenorhabditis elegans LIM-9 isoform...    27   7.3  
Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 14/67 (20%), Positives = 27/67 (40%)
 Frame = +3

Query: 231 SVDLDCDWSHDY*QAVPEASN*TRDSRWQTFSQKNHTEYYCNHMVRIYFGKLFFVIVFID 410
           S D D      Y  +    +   R S W +    N  +Y+C   + +YF  ++  ++ +D
Sbjct: 4   SADFDTSSLKSYTVSTSRTNLDVRKSNWTSLWFANLIQYFCGLQMSLYFTSMWPYLLKLD 63

Query: 411 QNVFITF 431
               + F
Sbjct: 64  PTAQLPF 70


>Z92780-8|CAI46553.1|  587|Caenorhabditis elegans Hypothetical
           protein F25H5.1b protein.
          Length = 587

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 309 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 342


>Z92780-7|CAI46552.1|  624|Caenorhabditis elegans Hypothetical
           protein F25H5.1a protein.
          Length = 624

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 346 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 379


>Z92780-6|CAI46551.1|  691|Caenorhabditis elegans Hypothetical
           protein F25H5.1f protein.
          Length = 691

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 346 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 379


>Z92780-5|CAI46550.1|  532|Caenorhabditis elegans Hypothetical
           protein F25H5.1c protein.
          Length = 532

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 254 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 287


>Z81068-16|CAJ30230.1|  587|Caenorhabditis elegans Hypothetical
           protein F25H5.1b protein.
          Length = 587

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 309 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 342


>Z81068-15|CAB02980.2|  624|Caenorhabditis elegans Hypothetical
           protein F25H5.1a protein.
          Length = 624

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 346 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 379


>Z81068-14|CAJ30229.1|  691|Caenorhabditis elegans Hypothetical
           protein F25H5.1f protein.
          Length = 691

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 346 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 379


>Z81068-13|CAJ30228.1|  532|Caenorhabditis elegans Hypothetical
           protein F25H5.1c protein.
          Length = 532

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 254 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 287


>Z81068-11|CAB02981.1|  454|Caenorhabditis elegans Hypothetical
           protein F25H5.1e protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 176 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 209


>EF443133-1|ABO31113.1|  656|Caenorhabditis elegans LIM-9 isoform
           protein.
          Length = 656

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 112 LNLTRLNYCNDSLIFS*FITVKTDTELRSDHYCCF 8
           L+  R + C D LIF+   T   + +  SDH+CC+
Sbjct: 346 LHKPRCSAC-DELIFAGEYTKAMNKDWHSDHFCCW 379


>Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical
           protein F14F8.7 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 321 FSQKNHTEYYCNHMVRIYFGKLFFVIVFIDQNV---FITFLMLNYKVTRVVIEL 473
           FS+ N  + Y      I FG+LF++I F+ + V   FI  ++L      ++IEL
Sbjct: 194 FSKNNIEKMYGIEQTGI-FGQLFYLIFFLTETVLFEFIPSILLLITTICLIIEL 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,171,743
Number of Sequences: 27780
Number of extensions: 192435
Number of successful extensions: 447
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)