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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b16r
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006617-8|AAF39772.2|  309|Caenorhabditis elegans Hypothetical ...    33   0.16 
Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81549-6|CAB04475.1|  523|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z75546-3|CAA99891.1|  581|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z82090-6|CAB51468.1|  278|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z81526-10|CAB51464.1|  278|Caenorhabditis elegans Hypothetical p...    28   8.0  
Z81055-9|CAB02898.3|  562|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z70286-4|CAA94291.2|  533|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z68119-7|CAA92193.2|  360|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AJ582070-1|CAE46540.1|  533|Caenorhabditis elegans flavin monoox...    28   8.0  

>AC006617-8|AAF39772.2|  309|Caenorhabditis elegans Hypothetical
           protein C39B5.9 protein.
          Length = 309

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +3

Query: 381 RYFSFVEHLHNFSHWHGVFFKYDKFIRIADNLVLTSGEFSCEPVQLEEFHPVVL 542
           +Y   + HL NF  +  + F     I+I D+L+  S   SCE + + E HP+ L
Sbjct: 209 KYIEHLFHLQNFYIYEMIDFSTQAAIKIRDDLMRRSTFESCE-IYIREAHPIEL 261


>Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical
           protein F26D2.7 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 216 KRLIVKNKRFERSQVLAFVVEWIDENKELEWE--STFSTSRQHESFRHVTELFRHIKRYF 389
           + +I KN  FE S V  F++   +EN  ++W+  S   ++     F++   +F  +K YF
Sbjct: 163 REVIRKNFDFEISSVARFIMMPYNENNTIQWKALSLLISAGILICFQYFIFVFFGLKIYF 222

Query: 390 SFVEHLHNFS 419
           +    L +FS
Sbjct: 223 NMKLRLKSFS 232


>Z81549-6|CAB04475.1|  523|Caenorhabditis elegans Hypothetical
           protein F55C9.7 protein.
          Length = 523

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
 Frame = +3

Query: 18  LWILRMQN----SSVYLNL---IFWNNIRLCVIRRNIEFVREPFTLVVNENILEIHV 167
           +W+ R+ N    S +YL+L     WNN  +C  RRN+ ++    T +++ N   +HV
Sbjct: 377 VWLQRIVNQFSGSFLYLDLDVNSIWNNQIMCTNRRNL-YISTSCTELLSVNCTHLHV 432


>Z75546-3|CAA99891.1|  581|Caenorhabditis elegans Hypothetical
           protein R05D11.4 protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = +3

Query: 255 QVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHI--KRYFSFVEHLHNFSHWH 428
           + LAF +  IDE  EL+  + +S+S   +    V E  R +  + Y  F+++  N S   
Sbjct: 176 KTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISA 235

Query: 429 GVFFKYDKFIRIADNLVLT 485
             F   +  I+ AD LV T
Sbjct: 236 ANFSGEETDIQHADILVST 254


>Z82090-6|CAB51468.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK337.5 protein.
          Length = 278

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 488 AGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMS 369
           AG NK     NE  ++ ++ + +TE+++ ++  KVP D S
Sbjct: 225 AGSNKC----NEHAMWADEGISLTEMLEEIEARKVPVDSS 260


>Z81526-10|CAB51464.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK337.5 protein.
          Length = 278

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 488 AGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMS 369
           AG NK     NE  ++ ++ + +TE+++ ++  KVP D S
Sbjct: 225 AGSNKC----NEHAMWADEGISLTEMLEEIEARKVPVDSS 260


>Z81055-9|CAB02898.3|  562|Caenorhabditis elegans Hypothetical
           protein F01G10.10 protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 78  IRLCVIRRNIEFVREPFTLVVNENILEIHVRNLE*CINNGAI 203
           I L ++   + ++RE    V+NE IL++ + N+   I NG +
Sbjct: 39  IYLRIMPNGLAYLREVGMKVINEQILKLQLPNIREPIENGEV 80


>Z70286-4|CAA94291.2|  533|Caenorhabditis elegans Hypothetical
           protein K08C7.2 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +3

Query: 231 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 401
           K +  E S V+   V  I+ +KE+   S F    +  +F H TE++R++  Y    E
Sbjct: 47  KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101


>Z68119-7|CAA92193.2|  360|Caenorhabditis elegans Hypothetical
           protein T18D3.3 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/46 (26%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -1

Query: 725 VYFSKEEIKX-NHVHDVKVRQPRLNHSPFNVNIEVDSNVASDAVVK 591
           V+ S E+I+    VHD+++    ++    +V++E+D+N  S ++++
Sbjct: 278 VFSSLEDIEGVKKVHDLRIWSLTMDKIALSVHLEIDANSQSQSILR 323


>AJ582070-1|CAE46540.1|  533|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +3

Query: 231 KNKRFERSQVLAFVVEWIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFVE 401
           K +  E S V+   V  I+ +KE+   S F    +  +F H TE++R++  Y    E
Sbjct: 47  KPQETELSSVMKTTV--INTSKEMTAYSDFPPESRMANFMHNTEMYRYLLNYSKHYE 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,657,907
Number of Sequences: 27780
Number of extensions: 378673
Number of successful extensions: 985
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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