BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_G11 (625 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.29 Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.29 D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 0.29 AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.29 AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.29 Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 32 0.38 AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.51 U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 31 0.67 U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 31 0.67 U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 31 0.67 AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 31 0.67 Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 30 1.5 L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 1.5 AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 30 1.5 Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.7 X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.7 U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 2.7 U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.7 AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 27 8.2 >Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein K08C7.3b protein. Length = 3672 Score = 32.3 bits (70), Expect = 0.29 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = +2 Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490 K E L++ + + +E+LRK V+ + ++ VQE KL + +N+ Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603 Query: 491 QXTNEKLA 514 + T K++ Sbjct: 2604 EETRAKIS 2611 >Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein K08C7.3a protein. Length = 3704 Score = 32.3 bits (70), Expect = 0.29 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = +2 Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490 K E L++ + + +E+LRK V+ + ++ VQE KL + +N+ Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603 Query: 491 QXTNEKLA 514 + T K++ Sbjct: 2604 EETRAKIS 2611 >D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. Length = 1518 Score = 32.3 bits (70), Expect = 0.29 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = +2 Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490 K E L++ + + +E+LRK V+ + ++ VQE KL + +N+ Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417 Query: 491 QXTNEKLA 514 + T K++ Sbjct: 418 EETRAKIS 425 >AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha chain protein. Length = 3704 Score = 32.3 bits (70), Expect = 0.29 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = +2 Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490 K E L++ + + +E+LRK V+ + ++ VQE KL + +N+ Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603 Query: 491 QXTNEKLA 514 + T K++ Sbjct: 2604 EETRAKIS 2611 >AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha protein. Length = 3704 Score = 32.3 bits (70), Expect = 0.29 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = +2 Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490 K E L++ + + +E+LRK V+ + ++ VQE KL + +N+ Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603 Query: 491 QXTNEKLA 514 + T K++ Sbjct: 2604 EETRAKIS 2611 >Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical protein F58G6.1 protein. Length = 461 Score = 31.9 bits (69), Expect = 0.38 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 293 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 439 +G A E +Q N+ + ++ K H DV+ ++ALR L A Q Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQ 72 >AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical protein ZK973.11 protein. Length = 447 Score = 31.5 bits (68), Expect = 0.51 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +1 Query: 148 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 255 +EFHKT E+ L K D + F AW DGS+ Q Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302 >U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated protein 10, isoform b protein. Length = 1371 Score = 31.1 bits (67), Expect = 0.67 Identities = 21/83 (25%), Positives = 42/83 (50%) Frame = +3 Query: 42 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQ 221 H + + + R +++GP++ T SR ++ +TP Q P ++ V AHQ + G Q+ Sbjct: 272 HNQNMTQNQR-NQTGPQNQQRTNDSRTMK--QTPQQQ-PSQYQNNVGAAHQHHNQHGQQE 327 Query: 222 GLEGRLRVRAATAQRLRQESPGQ 290 ++ + R+R+ + GQ Sbjct: 328 QHHQQMNEQRTDNNRMRENTNGQ 350 >U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated protein 10, isoform a protein. Length = 1563 Score = 31.1 bits (67), Expect = 0.67 Identities = 21/83 (25%), Positives = 42/83 (50%) Frame = +3 Query: 42 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQ 221 H + + + R +++GP++ T SR ++ +TP Q P ++ V AHQ + G Q+ Sbjct: 272 HNQNMTQNQR-NQTGPQNQQRTNDSRTMK--QTPQQQ-PSQYQNNVGAAHQHHNQHGQQE 327 Query: 222 GLEGRLRVRAATAQRLRQESPGQ 290 ++ + R+R+ + GQ Sbjct: 328 QHHQQMNEQRTDNNRMRENTNGQ 350 >U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical protein C18H2.1 protein. Length = 1770 Score = 31.1 bits (67), Expect = 0.67 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 61 VLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 210 V C++ + + D +F KDI+ K+ HKTLE + + K +D Q Sbjct: 580 VFLECVSRLRKTAI--DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627 >AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting molecule UNC-10 protein. Length = 1563 Score = 31.1 bits (67), Expect = 0.67 Identities = 21/83 (25%), Positives = 42/83 (50%) Frame = +3 Query: 42 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQ 221 H + + + R +++GP++ T SR ++ +TP Q P ++ V AHQ + G Q+ Sbjct: 272 HNQNMTQNQR-NQTGPQNQQRTNDSRTMK--QTPQQQ-PSQYQNNVGAAHQHHNQHGQQE 327 Query: 222 GLEGRLRVRAATAQRLRQESPGQ 290 ++ + R+R+ + GQ Sbjct: 328 QHHQQMNEQRTDNNRMRENTNGQ 350 >Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical protein K08H10.1 protein. Length = 733 Score = 29.9 bits (64), Expect = 1.5 Identities = 15/90 (16%), Positives = 34/90 (37%) Frame = +2 Query: 296 GDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXX 475 G+A K EA + ++ ++ A D + + ++ EK+ ++ + + A Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436 Query: 476 VSSNVQXTNEKLAPKINAAYDDFAXNTQEV 565 K+ I+ AYD ++ Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEKASDI 466 >L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical protein R05D3.1 protein. Length = 1053 Score = 29.9 bits (64), Expect = 1.5 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 91 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 246 G +A ++F D++HHT F T + + +D D K W SE+ Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572 >AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. Length = 733 Score = 29.9 bits (64), Expect = 1.5 Identities = 15/90 (16%), Positives = 34/90 (37%) Frame = +2 Query: 296 GDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXX 475 G+A K EA + ++ ++ A D + + ++ EK+ ++ + + A Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436 Query: 476 VSSNVQXTNEKLAPKINAAYDDFAXNTQEV 565 K+ I+ AYD ++ Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEKASDI 466 >Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein K12F2.1 protein. Length = 1969 Score = 29.1 bits (62), Expect = 2.7 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +2 Query: 299 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESXKLA 469 D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++A Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758 Query: 470 XXVSSNVQ 493 + + V+ Sbjct: 1759 NELKNAVE 1766 >X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3 protein. Length = 1969 Score = 29.1 bits (62), Expect = 2.7 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +2 Query: 299 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESXKLA 469 D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++A Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758 Query: 470 XXVSSNVQ 493 + + V+ Sbjct: 1759 NELKNAVE 1766 >U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical protein C18C4.5b protein. Length = 1046 Score = 29.1 bits (62), Expect = 2.7 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +2 Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTNE 505 L+ + +E+ EEL+K+H + + L E+ Q +Q+ + SSN+ N+ Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785 Query: 506 KL 511 K+ Sbjct: 786 KI 787 >U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical protein C18C4.5a protein. Length = 1022 Score = 29.1 bits (62), Expect = 2.7 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +2 Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTNE 505 L+ + +E+ EEL+K+H + + L E+ Q +Q+ + SSN+ N+ Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785 Query: 506 KL 511 K+ Sbjct: 786 KI 787 >AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical protein F57B10.4 protein. Length = 691 Score = 27.5 bits (58), Expect = 8.2 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = +1 Query: 127 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDF 216 KD+++H K+ H L Q + + + D DF Sbjct: 67 KDVKNHQKKLHSFLAQSTDQVNSTIDKMDF 96 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,674,220 Number of Sequences: 27780 Number of extensions: 161320 Number of successful extensions: 768 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 708 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 762 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1363963182 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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