Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0062
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-6|AAK26143.2|  214|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z81522-2|CAB04238.1|  415|Caenorhabditis elegans Hypothetical pr...    28   4.8  

>AC090999-6|AAK26143.2|  214|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.11 protein.
          Length = 214

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 381 SYSQLLKSCHCKRTVFFFFYYCFDE-ISIGTRFCDDRFYELMFNEFIIPISKISLRAIVN 205
           S   LL+   C R VF+  Y C  + I++G    D R   +++N  +  ++   L+  VN
Sbjct: 107 SAKMLLEELKCARLVFYSLYRCIRQGIAVGHYLDDIRAKCILWNGEVADVNVHELKVCVN 166


>Z81522-2|CAB04238.1|  415|Caenorhabditis elegans Hypothetical
           protein F32B4.1 protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = -1

Query: 372 QLLKSCHCKRTVFFFFY-YCF----DEISIGTRFCDDRFYE 265
           + LK+C CK TV    Y +C+    DE SIG +F D +F E
Sbjct: 56  EFLKNCGCKSTVTGKLYDFCYKLPEDEKSIGKKF-DCKFVE 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,629
Number of Sequences: 27780
Number of extensions: 274935
Number of successful extensions: 549
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)