Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0047
         (809 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71266-1|CAA95839.1|  945|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81070-12|CAB03008.1|  495|Caenorhabditis elegans Hypothetical p...    29   5.2  
Z75544-6|CAA99882.1|  495|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AF174643-1|AAD51977.1|  495|Caenorhabditis elegans PP2A-B regula...    29   5.2  
Z81070-3|CAB02998.1|  408|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>Z71266-1|CAA95839.1|  945|Caenorhabditis elegans Hypothetical
           protein R06C7.1 protein.
          Length = 945

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 404 EYTTKGKDLWGRLNDKGKI 460
           EY  +G+DLWG L  KG I
Sbjct: 896 EYAKRGRDLWGELTTKGPI 914


>Z81070-12|CAB03008.1|  495|Caenorhabditis elegans Hypothetical
           protein F26E4.1 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 635 NNNEKCIKVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSS 516
           + N+K IK+W+++  +RKI D   NL     +  RI TSS
Sbjct: 152 STNDKTIKLWKISERERKIGDDAWNLP----RTNRINTSS 187


>Z75544-6|CAA99882.1|  495|Caenorhabditis elegans Hypothetical
           protein F26E4.1 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 635 NNNEKCIKVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSS 516
           + N+K IK+W+++  +RKI D   NL     +  RI TSS
Sbjct: 152 STNDKTIKLWKISERERKIGDDAWNLP----RTNRINTSS 187


>AF174643-1|AAD51977.1|  495|Caenorhabditis elegans PP2A-B
           regulatory subunit PR55/B protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 635 NNNEKCIKVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSS 516
           + N+K IK+W+++  +RKI D   NL     +  RI TSS
Sbjct: 152 STNDKTIKLWKISERERKIGDDAWNLP----RTNRINTSS 187


>Z81070-3|CAB02998.1|  408|Caenorhabditis elegans Hypothetical
           protein F26E4.4 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 419 GKDLWGRLNDKGKIFHRAGDICSVDQRSE 505
           G   WG LN+K K    AG+I  V+ R +
Sbjct: 345 GSMTWGALNEKSKRIDDAGEINDVEMRDD 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,453
Number of Sequences: 27780
Number of extensions: 299989
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)