Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0076
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.1 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 25  QTRRHL-GLRLTSLLQSVSLFFILVFYIDIFSNTFDLV 135
           Q + +L  LRL + L +V L +I+V ++ I S TFDL+
Sbjct: 239 QVKENLRALRLGTRLVAVVLVYIMVCFLGIVSLTFDLI 276


>Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical
           protein T02D1.4 protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 85  FILVFYIDIFSNTFDLVIYNRKNFYLYL 168
           FI VF + +F N  +L+IYN  +   Y+
Sbjct: 94  FIFVFLLALFGNVVNLLIYNSDHIKYYI 121


>AF016443-3|AAC24281.1|  395|Caenorhabditis elegans Hypothetical
           protein C17E7.7 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 414 KEYGSKPALNKG*YLTCYLSKMSFRRVLWLPMEY--KVNNSFF 292
           K++GS+P       LTC   KM FRRV+   +EY  K +N+ F
Sbjct: 60  KDFGSQPKQ----VLTCDACKMFFRRVVTEKLEYTCKCSNNCF 98


>AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical
           protein F33D11.9b protein.
          Length = 676

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +1

Query: 148 KNFYLYLMKQDVHFSFIKQ-LIPIRN*NIHMSRLLSNRQCDFWTIIGKSEKRIIDFVFH 321
           +++++Y++  D+HFS I   +IP+    I +S L+ +   + WT I + +  ++   FH
Sbjct: 377 QSYFMYVLADDLHFSSIAMYIIPL---TILVSPLVISAYFE-WTKIQEFQFPVVHLAFH 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,465,797
Number of Sequences: 27780
Number of extensions: 407800
Number of successful extensions: 968
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)