Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0063
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64846-11|AAG24118.2|  231|Caenorhabditis elegans Serpentine rec...    35   0.076
U64846-10|AAW88397.1|  341|Caenorhabditis elegans Serpentine rec...    35   0.076
U64846-9|AAG24117.3|  343|Caenorhabditis elegans Serpentine rece...    35   0.076
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    30   2.2  
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    30   2.2  
Z78064-10|CAB01510.3|  299|Caenorhabditis elegans Hypothetical p...    28   8.7  

>U64846-11|AAG24118.2|  231|Caenorhabditis elegans Serpentine
           receptor, class h protein194, isoform a protein.
          Length = 231

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = +2

Query: 170 YQLTQKYFGVIIKKVPRPLVCFIYLLCTLVLNKELYYY 283
           +QL +K+F V++ ++  PL+CF++ L +  L+  L YY
Sbjct: 126 FQLQKKFFIVLVIQMSIPLICFLFPLISAALSVLLNYY 163


>U64846-10|AAW88397.1|  341|Caenorhabditis elegans Serpentine
           receptor, class h protein194, isoform b protein.
          Length = 341

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = +2

Query: 170 YQLTQKYFGVIIKKVPRPLVCFIYLLCTLVLNKELYYY 283
           +QL +K+F V++ ++  PL+CF++ L +  L+  L YY
Sbjct: 236 FQLQKKFFIVLVIQMSIPLICFLFPLISAALSVLLNYY 273


>U64846-9|AAG24117.3|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein193 protein.
          Length = 343

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = +2

Query: 170 YQLTQKYFGVIIKKVPRPLVCFIYLLCTLVLNKELYYY 283
           +QL +K+F V++ ++  PL+CF++ L +  L+  L YY
Sbjct: 237 FQLQKKFFIVLVIQMSIPLICFLFPLISAALSVLLNYY 274


>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
            protein 2 protein.
          Length = 1338

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
 Frame = -2

Query: 466  GYDFYYTML--FLRRECTFYLHCVLC--TPCPC*GHGTGRLWT*-GADESCWTGTSDPQI 302
            GY  Y  ++  F       +L+ + C  TP        G  W   G D  CW  TS P I
Sbjct: 982  GYQLYMMLIQVFEPNRTRIFLYYLFCYGTPAVVVAISAGIKWEDYGTDSYCWIDTSTPTI 1041

Query: 301  CGLKAIIII 275
                A II+
Sbjct: 1042 WAFVAPIIV 1050


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
            protein LAT-2 protein.
          Length = 1338

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
 Frame = -2

Query: 466  GYDFYYTML--FLRRECTFYLHCVLC--TPCPC*GHGTGRLWT*-GADESCWTGTSDPQI 302
            GY  Y  ++  F       +L+ + C  TP        G  W   G D  CW  TS P I
Sbjct: 982  GYQLYMMLIQVFEPNRTRIFLYYLFCYGTPAVVVAISAGIKWEDYGTDSYCWIDTSTPTI 1041

Query: 301  CGLKAIIII 275
                A II+
Sbjct: 1042 WAFVAPIIV 1050


>Z78064-10|CAB01510.3|  299|Caenorhabditis elegans Hypothetical
           protein F57B1.1 protein.
          Length = 299

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 530 CGRACGLKDFLPPAITQTIILRV*FLL 450
           C  + G+K+  PP I QTI + + F+L
Sbjct: 154 CETSSGIKNIAPPTIVQTIEILIQFIL 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,190,169
Number of Sequences: 27780
Number of extensions: 436812
Number of successful extensions: 1026
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)