Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0012
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division c...    52   4e-07
U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division c...    52   4e-07
U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division c...    52   4e-07
U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division c...    52   4e-07
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    52   4e-07
AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14 phosph...    52   4e-07
AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14 phosph...    52   4e-07
AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14 phosph...    52   4e-07
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    52   4e-07
AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14 phosph...    52   4e-07
AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein phosp...    52   4e-07
AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC006617-2|AAF39765.2|  442|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical p...    27   9.4  
Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division
           cycle related protein14, isoform c protein.
          Length = 681

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division
           cycle related protein14, isoform d protein.
          Length = 695

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division
           cycle related protein14, isoform e protein.
          Length = 707

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division
           cycle related protein14, isoform a protein.
          Length = 693

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
           cycle related protein14, isoform b protein.
          Length = 1063

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14
           phosphatase isoform E protein.
          Length = 707

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14
           phosphatase isoform D protein.
          Length = 695

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14
           phosphatase isoform C protein.
          Length = 681

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
           phosphatase isoform B protein.
          Length = 1063

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14
           phosphatase isoform A protein.
          Length = 693

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein
           phosphatase CDC14 protein.
          Length = 681

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
 Frame = +1

Query: 19  LSDRLYFATLKT----GYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLN 186
           L +RLYF             K  + + + +I ++  YE FY DFGP++L  LY+ C ++ 
Sbjct: 21  LPNRLYFGCFPNPDAIDKSDKSVKKTCFININNKFHYEPFYEDFGPWNLSVLYRLCVQVG 80

Query: 187 E--ELDRNPKKKIVYY-----TSNNENLRLNAAYLIGSYQV 288
           +  E++    +++V +     T   + +R+N AY++G+Y +
Sbjct: 81  KLLEVEEKRSRRVVLFCQDDGTGQYDKIRVNTAYVLGAYLI 121


>AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical
           protein Y51H4A.5 protein.
          Length = 498

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +1

Query: 85  KYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLNEELDRNPKKKIVYY 228
           K FH   E+ Y N      PYH+C         + ELD N    + Y+
Sbjct: 440 KLFHHRSEVWYNNNMSTTEPYHICAEADGFYCSSRELDTNIADHLTYF 487


>AC006617-2|AAF39765.2|  442|Caenorhabditis elegans Hypothetical
           protein C39B5.5 protein.
          Length = 442

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +1

Query: 85  KYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLNEELDRNPKKKIVYY 228
           K FH   E+ Y N      PYH+C         N +LD +    + Y+
Sbjct: 384 KLFHHRTEVWYNNNMTTTDPYHICAEADGLYCSNRQLDTDIPDHLTYF 431


>Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.18 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/58 (25%), Positives = 21/58 (36%)
 Frame = +1

Query: 64  PKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLNEELDRNPKKKIVYYTSN 237
           P      + FH   E+ Y N      PY +C         N +LD  P   + Y+  N
Sbjct: 266 PPQYGKDELFHHRTEVWYNNNMSSTDPYLICAEADGLYCSNRQLDSYPPDHLTYFDIN 323


>Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical
           protein T23F1.7a protein.
          Length = 779

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
 Frame = +1

Query: 22  SDRLYFATLKTGYKPKPTRNSKYFHIEDEIVYENFYFDFG---PYHLCHLYQFCKKLNEE 192
           +DR YFA +     P     ++ FH++     E   +D G      +   +++  K N+ 
Sbjct: 118 ADRKYFAMMDHAPNPGMNPQNETFHLKIVNNNERITYDIGLRKEESVIQAFKWNGKFNDF 177

Query: 193 LDRNPKKKIVYYTSNNENLRLNAAYLIGSYQVCSLLRMIYDRVI 324
           +     K  +YY S+ E   L      G + V  L   IY+  I
Sbjct: 178 VFVESNK--IYYQSSPEEEGLTRVSNGGEHTVDGLFDWIYEEEI 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,410,431
Number of Sequences: 27780
Number of extensions: 259007
Number of successful extensions: 624
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)