Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c15
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical p...    33   0.22 
Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical p...    33   0.22 
Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical p...    33   0.22 
Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical p...    33   0.22 
Z29117-10|CAA82375.2|  182|Caenorhabditis elegans Hypothetical p...    32   0.29 
U23179-6|AAK68205.1|  341|Caenorhabditis elegans Serpentine rece...    28   6.3  
AL032627-1|CAB63352.2|  444|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/54 (29%), Positives = 35/54 (64%)
 Frame = +3

Query: 291 IVDTVALLIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSLAFINKE 452
           +VD  +L+ +V++T + +V LHKK V+  K+   +  + +++  + +L F+NK+
Sbjct: 448 LVDMTSLIDQVSLTFLKLV-LHKKSVMYKKISYAYSTLSASLTNSQNLDFVNKK 500


>Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/54 (29%), Positives = 35/54 (64%)
 Frame = +3

Query: 291 IVDTVALLIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSLAFINKE 452
           +VD  +L+ +V++T + +V LHKK V+  K+   +  + +++  + +L F+NK+
Sbjct: 448 LVDMTSLIDQVSLTFLKLV-LHKKSVMYKKISYAYSTLSASLTNSQNLDFVNKK 500


>Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/54 (29%), Positives = 35/54 (64%)
 Frame = +3

Query: 291 IVDTVALLIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSLAFINKE 452
           +VD  +L+ +V++T + +V LHKK V+  K+   +  + +++  + +L F+NK+
Sbjct: 448 LVDMTSLIDQVSLTFLKLV-LHKKSVMYKKISYAYSTLSASLTNSQNLDFVNKK 500


>Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/54 (29%), Positives = 35/54 (64%)
 Frame = +3

Query: 291 IVDTVALLIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSLAFINKE 452
           +VD  +L+ +V++T + +V LHKK V+  K+   +  + +++  + +L F+NK+
Sbjct: 448 LVDMTSLIDQVSLTFLKLV-LHKKSVMYKKISYAYSTLSASLTNSQNLDFVNKK 500


>Z29117-10|CAA82375.2|  182|Caenorhabditis elegans Hypothetical
           protein C48B4.10 protein.
          Length = 182

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 15/54 (27%), Positives = 33/54 (61%)
 Frame = +3

Query: 273 SELIRLIVDTVALLIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSL 434
           ++ I L++ +V +++ V    VF+    K+H LLM+ + Y  +I++ + F Y++
Sbjct: 48  NDKIYLVLLSVGIVLNVFTVVVFI----KEHKLLMRAHYYSALIFTVVPFIYAV 97


>U23179-6|AAK68205.1|  341|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 1 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +3

Query: 312 LIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSLAFINKETA 458
           L E++ T+ F + +   H+L +  YL   I   T+G  +  ++IN   A
Sbjct: 229 LEEISQTSKFTLIVSFTHILFIGWYLGVTIFIRTVGETFFGSYINYTVA 277


>AL032627-1|CAB63352.2|  444|Caenorhabditis elegans Hypothetical
           protein Y41C4A.1 protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 443 QQGDSKRIILNFIPTDTANLLGNINMEL 526
           +QGD   I L+ I  D A L+G + M+L
Sbjct: 227 KQGDKNYIKLHMIQVDPAKLIGRVTMKL 254


>Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical
           protein C12D8.12 protein.
          Length = 351

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 276 ELIRLIVDTVALLIEVTMTTVFVVALHKKHVLLMKLYLYFEIIYSTIGFAYSL 434
           EL++ IV   ALLI + + T+    +  K    M  Y Y  +  S     YS+
Sbjct: 3   ELLKDIVQCFALLISIFLNTILTYLILTKSNSKMGSYKYIMMYLSLSALCYSV 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,467
Number of Sequences: 27780
Number of extensions: 274491
Number of successful extensions: 752
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)